chore: scaffold package

.cruft.json

@@ -0,0 +1,32 @@
+{
+  "template": "https://github.com/radix-ai/poetry-cookiecutter",
+  "commit": "4127874124193c60cd5e2bfaa025473b8f30411f",
+  "checkout": null,
+  "context": {
+    "cookiecutter": {
+      "package_name": "Conformal Tights",
+      "package_description": "A scikit-learn meta-estimator for computing tight conformal predictions",
+      "package_url": "https://github.com/radix-ai/conformal-tights",
+      "author_name": "Laurent Sorber",
+      "author_email": "[email protected]",
+      "python_version": "3.10",
+      "docker_image": "python:$PYTHON_VERSION-slim",
+      "development_environment": "strict",
+      "with_conventional_commits": "1",
+      "with_fastapi_api": "0",
+      "with_jupyter_lab": "0",
+      "with_pydantic_typing": "0",
+      "with_sentry_logging": "0",
+      "with_streamlit_app": "0",
+      "with_typer_cli": "0",
+      "continuous_integration": "GitHub",
+      "docstring_style": "NumPy",
+      "private_package_repository_name": "",
+      "private_package_repository_url": "",
+      "__package_name_kebab_case": "conformal-tights",
+      "__package_name_snake_case": "conformal_tights",
+      "_template": "https://github.com/radix-ai/poetry-cookiecutter"
+    }
+  },
+  "directory": null
+}

.devcontainer/devcontainer.json

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+{
+    "name": "conformal-tights",
+    "dockerComposeFile": "../docker-compose.yml",
+    "service": "devcontainer",
+    "workspaceFolder": "/workspaces/${localWorkspaceFolderBasename}/",
+    "remoteUser": "user",
+    "overrideCommand": true,
+    "postStartCommand": "cp --update /opt/build/poetry/poetry.lock /workspaces/${localWorkspaceFolderBasename}/ && mkdir -p /workspaces/${localWorkspaceFolderBasename}/.git/hooks/ && cp --update /opt/build/git/* /workspaces/${localWorkspaceFolderBasename}/.git/hooks/",
+    "customizations": {
+        "vscode": {
+            "extensions": [
+                "charliermarsh.ruff",
+                "ms-python.mypy-type-checker",
+                "ms-python.python",
+                "ms-toolsai.jupyter",
+                "ryanluker.vscode-coverage-gutters",
+                "tamasfe.even-better-toml",
+                "visualstudioexptteam.vscodeintellicode"
+            ],
+            "settings": {
+                "coverage-gutters.coverageFileNames": [
+                    "reports/coverage.xml"
+                ],
+                "editor.codeActionsOnSave": {
+                    "source.fixAll": true,
+                    "source.organizeImports": true
+                },
+                "editor.formatOnSave": true,
+                "[python]": {
+                    "editor.defaultFormatter": "charliermarsh.ruff"
+                },
+                "[toml]": {
+                    "editor.formatOnSave": false
+                },
+                "editor.rulers": [
+                    100
+                ],
+                "files.autoSave": "onFocusChange",
+                "jupyter.kernels.excludePythonEnvironments": ["/usr/local/bin/python"],
+                "mypy-type-checker.importStrategy": "fromEnvironment",
+                "notebook.formatOnSave.enabled": true,
+                "python.defaultInterpreterPath": "/opt/conformal-tights-env/bin/python",
+                "python.terminal.activateEnvironment": false,
+                "python.testing.pytestEnabled": true,
+                "ruff.importStrategy": "fromEnvironment",
+                "ruff.logLevel": "warn",
+                "terminal.integrated.defaultProfile.linux": "zsh",
+                "terminal.integrated.profiles.linux": {
+                    "zsh": {
+                        "path": "/usr/bin/zsh"
+                    }
+                }
+            }
+        }
+    }
+}

.dockerignore

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+# Caches
+.*_cache/
+
+# Git
+.git/

.github/dependabot.yml

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+version: 2
+
+updates:
+  - package-ecosystem: github-actions
+    directory: /
+    schedule:
+      interval: monthly
+    commit-message:
+      prefix: "ci"
+      prefix-development: "ci"
+      include: "scope"
+  - package-ecosystem: pip
+    directory: /
+    schedule:
+      interval: monthly
+    commit-message:
+      prefix: "build"
+      prefix-development: "build"
+      include: "scope"
+    versioning-strategy: lockfile-only
+    allow:
+      - dependency-type: "all"

.github/workflows/publish.yml

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+name: Publish
+
+on:
+  release:
+    types:
+      - created
+
+jobs:
+  publish:
+    runs-on: ubuntu-latest
+
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+
+      - name: Set up Python
+        uses: actions/setup-python@v4
+        with:
+          python-version: "3.10"
+
+      - name: Install Poetry
+        run: pip install --no-input poetry
+
+      - name: Publish package
+        run: |
+          poetry config pypi-token.pypi "${{ secrets.POETRY_PYPI_TOKEN_PYPI }}"
+          poetry publish --build

.github/workflows/test.yml

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+name: Test
+
+on:
+  push:
+    branches:
+      - main
+      - master
+  pull_request:
+
+jobs:
+  test:
+    runs-on: ubuntu-latest
+
+    strategy:
+      fail-fast: false
+      matrix:
+        python-version: ["3.10"]
+
+    name: Python ${{ matrix.python-version }}
+
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+
+      - name: Set up Node.js
+        uses: actions/setup-node@v4
+        with:
+          node-version: 21
+
+      - name: Install @devcontainers/cli
+        run: npm install --location=global @devcontainers/[email protected]
+
+      - name: Start Dev Container
+        run: |
+          git config --global init.defaultBranch main
+          PYTHON_VERSION=${{ matrix.python-version }} devcontainer up --workspace-folder .
+
+      - name: Lint package
+        run: devcontainer exec --workspace-folder . poe lint
+
+      - name: Test package
+        run: devcontainer exec --workspace-folder . poe test
+
+      - name: Upload coverage
+        uses: codecov/codecov-action@v3
+        with:
+          files: reports/coverage.xml

.gitignore

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+# Coverage.py
+htmlcov/
+reports/
+
+# cruft
+*.rej
+
+# Data
+*.csv*
+*.dat*
+*.pickle*
+*.xls*
+*.zip*
+data/
+
+# direnv
+.envrc
+
+# dotenv
+.env
+
+# Hypothesis
+.hypothesis/
+
+# Jupyter
+*.ipynb
+.ipynb_checkpoints/
+notebooks/
+
+# macOS
+.DS_Store
+
+# mypy
+.dmypy.json
+.mypy_cache/
+
+# Node.js
+node_modules/
+
+# Poetry
+.venv/
+dist/
+
+# PyCharm
+.idea/
+
+# pyenv
+.python-version
+
+# pytest
+.pytest_cache/
+
+# Python
+__pycache__/
+*.py[cdo]
+
+# Ruff
+.ruff_cache/
+
+# Terraform
+.terraform/
+
+# VS Code
+.vscode/

.pre-commit-config.yaml

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+# https://pre-commit.com
+default_install_hook_types: [commit-msg, pre-commit]
+default_stages: [commit, manual]
+fail_fast: true
+repos:
+  - repo: meta
+    hooks:
+      - id: check-useless-excludes
+  - repo: https://github.com/pre-commit/pygrep-hooks
+    rev: v1.10.0
+    hooks:
+      - id: python-check-mock-methods
+      - id: python-use-type-annotations
+      - id: rst-backticks
+      - id: rst-directive-colons
+      - id: rst-inline-touching-normal
+      - id: text-unicode-replacement-char
+  - repo: https://github.com/pre-commit/pre-commit-hooks
+    rev: v4.5.0
+    hooks:
+      - id: check-added-large-files
+      - id: check-ast
+      - id: check-builtin-literals
+      - id: check-case-conflict
+      - id: check-docstring-first
+      - id: check-json
+      - id: check-merge-conflict
+      - id: check-shebang-scripts-are-executable
+      - id: check-symlinks
+      - id: check-toml
+      - id: check-vcs-permalinks
+      - id: check-xml
+      - id: check-yaml
+      - id: debug-statements
+      - id: destroyed-symlinks
+      - id: detect-private-key
+      - id: end-of-file-fixer
+        types: [python]
+      - id: fix-byte-order-marker
+      - id: mixed-line-ending
+      - id: name-tests-test
+        args: [--pytest-test-first]
+      - id: trailing-whitespace
+        types: [python]
+  - repo: local
+    hooks:
+      - id: commitizen
+        name: commitizen
+        entry: cz check
+        args: [--commit-msg-file]
+        require_serial: true
+        language: system
+        stages: [commit-msg]
+      - id: ruff-check
+        name: ruff check
+        entry: ruff check
+        args: ["--force-exclude", "--extend-fixable=ERA001,F401,F841,T201,T203"]
+        require_serial: true
+        language: system
+        types_or: [python, pyi]
+      - id: ruff-format
+        name: ruff format
+        entry: ruff format
+        args: [--force-exclude]
+        require_serial: true
+        language: system
+        types_or: [python, pyi]
+      - id: shellcheck
+        name: shellcheck
+        entry: shellcheck
+        args: [--check-sourced]
+        language: system
+        types: [shell]
+      - id: poetry-check
+        name: poetry check
+        entry: poetry check
+        language: system
+        pass_filenames: false
+      - id: mypy
+        name: mypy
+        entry: mypy
+        language: system
+        types: [python]