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@MDAnalysis @wolberlab

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  1. wolberlab/OpenMMDL wolberlab/OpenMMDL Public

    Interface to OpenMM for easy setup of molecular dynamic simulations of protein-ligand complexes

    Python 72 11

  2. MDonatello MDonatello Public

    2D small molecule visualization for MDAnalysis

    Python 2 1

  3. MDAnalysis/mdanalysis MDAnalysis/mdanalysis Public

    MDAnalysis is a Python library to analyze molecular dynamics simulations.

    Python 1.3k 659

  4. chemosim-lab/ProLIF chemosim-lab/ProLIF Public

    Interaction Fingerprints for protein-ligand complexes and more

    Python 378 71