clang-format: run indent-all #892
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| name: github-linux | |
| on: | |
| push: | |
| pull_request: | |
| types: | |
| - opened | |
| - reopened | |
| - synchronize | |
| - ready_for_review | |
| concurrency: | |
| group: ${ {github.event_name }}-${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: ${{github.event_name == 'pull_request'}} | |
| permissions: | |
| contents: read | |
| jobs: | |
| ######################## | |
| # linux-release-serial # | |
| ######################## | |
| linux-release-serial: | |
| # simple serial release build using g++ | |
| name: linux release serial | |
| runs-on: [ubuntu-22.04] | |
| # | |
| # The following condition only runs the workflow on 'push' or if the | |
| # 'pull_request' is not a draft. This is only useful for hackathons or | |
| # other situations when the CI is massively overburdened with pull | |
| # requests. | |
| # | |
| # if: ${{ github.event_name == 'push' || !github.event.pull_request.draft }} | |
| container: | |
| image: dealii/dependencies:jammy | |
| options: --user root | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: info | |
| run: | | |
| python --version | |
| g++ -v | |
| cmake --version | |
| - name: configure deal.II | |
| run: | | |
| # sanitize PYTHONPATH | |
| unset PYTHONPATH | |
| mkdir build | |
| cd build | |
| cmake -D CMAKE_BUILD_TYPE=Release \ | |
| -D DEAL_II_CXX_FLAGS='-Werror -std=c++20' \ | |
| -D DEAL_II_EARLY_DEPRECATIONS=ON \ | |
| -DDEAL_II_COMPONENT_PYTHON_BINDINGS=ON \ | |
| .. | |
| - name: print detailed.log | |
| run: cat build/detailed.log | |
| - name: build | |
| run: | | |
| cd build | |
| make VERBOSE=1 -j2 | |
| - name: test | |
| run: | | |
| cd build | |
| make -j2 \ | |
| setup_tests_examples \ | |
| setup_tests_quick_tests | |
| ctest --output-on-failure -j2 -VV | |
| ######################## | |
| # linux-debug-parallel # | |
| ######################## | |
| linux-debug-parallel: | |
| # simple parallel debug build using g++ | |
| name: linux debug parallel | |
| runs-on: [ubuntu-22.04] | |
| # | |
| # The following condition only runs the workflow on 'push' or if the | |
| # 'pull_request' is not a draft. This is only useful for hackathons or | |
| # other situations when the CI is massively overburdened with pull | |
| # requests. | |
| # | |
| # if: ${{ github.event_name == 'push' || !github.event.pull_request.draft }} | |
| container: | |
| image: dealii/dependencies:jammy | |
| options: --user root --env OMPI_ALLOW_RUN_AS_ROOT=1 --env OMPI_ALLOW_RUN_AS_ROOT_CONFIRM=1 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: info | |
| run: | | |
| mpicc -v | |
| cmake --version | |
| - name: configure deal.II | |
| run: | | |
| mkdir build | |
| cd build | |
| cmake -D CMAKE_BUILD_TYPE=Debug \ | |
| -D DEAL_II_CXX_FLAGS='-Werror -std=c++20' \ | |
| -D DEAL_II_EARLY_DEPRECATIONS=ON \ | |
| -D DEAL_II_COMPONENT_EXAMPLES="OFF" \ | |
| -D DEAL_II_WITH_MPI="ON" \ | |
| -D DEAL_II_WITH_CGAL="ON" \ | |
| -D DEAL_II_WITH_HDF5="ON" \ | |
| -D DEAL_II_WITH_METIS="ON" \ | |
| -D DEAL_II_WITH_PETSC="ON" \ | |
| -D DEAL_II_WITH_TRILINOS="ON" \ | |
| -D DEAL_II_WITH_VTK="ON" \ | |
| .. | |
| - name: print detailed.log | |
| run: cat build/detailed.log | |
| - name: build | |
| run: | | |
| cd build | |
| make VERBOSE=1 -j2 | |
| - name: test | |
| run: | | |
| # Remove warning: "A high-performance Open MPI point-to-point | |
| # messaging module was unable to find any relevant network | |
| # interfaces." | |
| export OMPI_MCA_btl_base_warn_component_unused='0' | |
| cd build | |
| make -j2 \ | |
| setup_tests_examples \ | |
| setup_tests_quick_tests \ | |
| setup_tests_simplex \ | |
| setup_tests_vtk | |
| ctest --output-on-failure -j2 -VV | |
| ############################ | |
| # linux-debug-intel-oneapi # | |
| ############################ | |
| linux-debug-intel-oneapi: | |
| # parallel debug build with Intel oneAPI including MPI and MKL | |
| # | |
| # Based on https://github.com/oneapi-src/oneapi-ci | |
| # For a list of Intel packages see https://oneapi-src.github.io/oneapi-ci/#linux-apt | |
| name: linux debug intel oneapi | |
| runs-on: [ubuntu-22.04] | |
| # | |
| # The following condition only runs the workflow on 'push' or if the | |
| # 'pull_request' is not a draft. This is only useful for hackathons or | |
| # other situations when the CI is massively overburdened with pull | |
| # requests. | |
| # | |
| # if: ${{ github.event_name == 'push' || !github.event.pull_request.draft }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: setup apt repo | |
| run: | | |
| # oneapi-ci/scripts/setup_apt_repo_linux.sh | |
| wget https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS-2023.PUB | |
| sudo apt-key add GPG-PUB-KEY-INTEL-SW-PRODUCTS-2023.PUB | |
| echo "deb https://apt.repos.intel.com/oneapi all main" | sudo tee /etc/apt/sources.list.d/oneAPI.list | |
| sudo apt-get update -o Dir::Etc::sourcelist="sources.list.d/oneAPI.list" -o APT::Get::List-Cleanup="0" | |
| - name: collect versioned dependencies of apt packages | |
| run : | | |
| # oneapi-ci/scripts/apt_depends.sh | |
| apt-cache depends intel-oneapi-compiler-dpcpp-cpp \ | |
| intel-oneapi-mpi-devel \ | |
| intel-oneapi-mkl-devel \ | |
| intel-oneapi-tbb-devel | tee dependencies.txt | |
| - name: cache install | |
| id: cache-install | |
| uses: actions/cache@v3 | |
| with: | |
| path: /opt/intel/oneapi | |
| key: install-${{ hashFiles('**/dependencies.txt') }} | |
| - name: install | |
| if: steps.cache-install.outputs.cache-hit != 'true' | |
| run: | | |
| # oneapi-ci/scripts/install_linux_apt.sh | |
| sudo apt-get install -y intel-oneapi-compiler-dpcpp-cpp \ | |
| intel-oneapi-mpi-devel \ | |
| intel-oneapi-mkl-devel \ | |
| intel-oneapi-tbb-devel | |
| sudo apt-get clean | |
| - name: info | |
| run: | | |
| source /opt/intel/oneapi/setvars.sh | |
| export I_MPI_CXX=icpx | |
| mpiicpc -v | |
| cmake --version | |
| - name: configure deal.II | |
| run: | | |
| source /opt/intel/oneapi/setvars.sh | |
| mkdir build | |
| cd build | |
| cmake -D CMAKE_BUILD_TYPE=Debug \ | |
| -D CMAKE_CXX_COMPILER=icpx \ | |
| -D DEAL_II_CXX_FLAGS='-Werror -Wno-error=tautological-constant-compare' \ | |
| -D DEAL_II_EARLY_DEPRECATIONS=ON \ | |
| -D DEAL_II_WITH_MPI=ON \ | |
| -D DEAL_II_WITH_LAPACK=ON \ | |
| -D DEAL_II_WITH_TBB=ON \ | |
| -D MPI_DIR=${I_MPI_ROOT} \ | |
| -D BLAS_DIR=${MKLROOT} \ | |
| -D LAPACK_DIR=${MKLROOT} \ | |
| -D TBB_DIR=${TBBROOT} \ | |
| .. | |
| - name: print detailed.log | |
| run: cat build/detailed.log | |
| - name: build | |
| run: | | |
| source /opt/intel/oneapi/setvars.sh | |
| cd build | |
| make VERBOSE=1 -j2 | |
| - name: test | |
| run: | | |
| source /opt/intel/oneapi/setvars.sh | |
| cd build | |
| make -j2 \ | |
| setup_tests_examples \ | |
| setup_tests_quick_tests | |
| ctest --output-on-failure -j2 -VV | |
| ####################### | |
| # linux-debug-cuda-11 # | |
| ####################### | |
| linux-debug-cuda-11: | |
| # simple parallel debug build using cuda-11 | |
| name: linux debug cuda-11 | |
| runs-on: [ubuntu-20.04] | |
| # | |
| # The following condition only runs the workflow on 'push' or if the | |
| # 'pull_request' is not a draft. This is only useful for hackathons or | |
| # other situations when the CI is massively overburdened with pull | |
| # requests. | |
| # | |
| # if: ${{ github.event_name == 'push' || !github.event.pull_request.draft }} | |
| env: | |
| CUDA_ROOT: /usr/local/cuda | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: modules | |
| run: | | |
| wget https://developer.download.nvidia.com/compute/cuda/repos/ubuntu2004/x86_64/cuda-ubuntu2004.pin | |
| sudo mv cuda-ubuntu2004.pin /etc/apt/preferences.d/cuda-repository-pin-600 | |
| sudo apt-key adv --fetch-keys https://developer.download.nvidia.com/compute/cuda/repos/ubuntu2004/x86_64/3bf863cc.pub | |
| sudo add-apt-repository "deb http://developer.download.nvidia.com/compute/cuda/repos/ubuntu2004/x86_64/ /" | |
| sudo apt-get install -y software-properties-common | |
| sudo add-apt-repository ppa:ginggs/deal.ii-9.4.0-backports | |
| sudo apt-get update | |
| sudo apt-get install -yq --no-install-recommends \ | |
| cuda-toolkit-11-8 \ | |
| libp4est-dev \ | |
| libopenmpi-dev \ | |
| numdiff \ | |
| openmpi-bin \ | |
| libboost-all-dev | |
| - name: info | |
| run: | | |
| mpicc -v | |
| cmake --version | |
| - uses: actions/checkout@v3 | |
| with: | |
| repository: kokkos/kokkos | |
| ref: 3.7.00 | |
| path: kokkos | |
| - name: compile and install kokkos | |
| working-directory: kokkos | |
| run: | | |
| mkdir build | |
| cd build | |
| cmake -D BUILD_SHARED_LIBS=ON \ | |
| -D CMAKE_CXX_COMPILER=${GITHUB_WORKSPACE}/kokkos/bin/nvcc_wrapper \ | |
| -D CMAKE_INSTALL_PREFIX=${GITHUB_WORKSPACE}/../kokkos-install \ | |
| -D Kokkos_ENABLE_CUDA=ON \ | |
| -D Kokkos_ENABLE_CUDA_LAMBDA=ON \ | |
| -D Kokkos_ENABLE_CUDA_CONSTEXPR=ON \ | |
| -D Kokkos_ARCH_VOLTA70=ON \ | |
| .. | |
| make install | |
| - name: configure deal.II | |
| run: | | |
| mkdir build | |
| cd build | |
| cmake -D CMAKE_BUILD_TYPE=Debug \ | |
| -D CMAKE_CXX_COMPILER=${GITHUB_WORKSPACE}/kokkos/bin/nvcc_wrapper \ | |
| -D DEAL_II_CXX_FLAGS='-Werror -Wno-non-template-friend' \ | |
| -D DEAL_II_EARLY_DEPRECATIONS=ON \ | |
| -D DEAL_II_WITH_CUDA="ON" \ | |
| -D DEAL_II_WITH_KOKKOS="ON" \ | |
| -D KOKKOS_DIR=${GITHUB_WORKSPACE}/../kokkos-install \ | |
| -D DEAL_II_WITH_MPI="ON" \ | |
| -D DEAL_II_MPI_WITH_DEVICE_SUPPORT="ON" \ | |
| -D DEAL_II_WITH_P4EST="ON" \ | |
| -D DEAL_II_COMPONENT_EXAMPLES="ON" \ | |
| .. | |
| - name: print detailed.log | |
| run: cat build/detailed.log | |
| - name: build deal.II | |
| run: | | |
| cd build | |
| make VERBOSE=1 -j2 | |
| - name: build CUDA tests | |
| run: | | |
| cd build | |
| make -j2 setup_tests_cuda | |
| cd tests/cuda | |
| make -j2 compile_test_executables | |
| ############################# | |
| # linux-debug-cuda-11-clang # | |
| ############################# | |
| linux-debug-cuda-11-clang: | |
| # simple parallel debug build using cuda-11 and clang | |
| name: linux debug cuda-11 clang | |
| runs-on: [ubuntu-20.04] | |
| # | |
| # The following condition only runs the workflow on 'push' or if the | |
| # 'pull_request' is not a draft. This is only useful for hackathons or | |
| # other situations when the CI is massively overburdened with pull | |
| # requests. | |
| # | |
| # if: ${{ github.event_name == 'push' || !github.event.pull_request.draft }} | |
| env: | |
| CUDA_ROOT: /usr/local/cuda | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: modules | |
| run: | | |
| wget https://developer.download.nvidia.com/compute/cuda/repos/ubuntu2004/x86_64/cuda-ubuntu2004.pin | |
| sudo mv cuda-ubuntu2004.pin /etc/apt/preferences.d/cuda-repository-pin-600 | |
| sudo apt-key adv --fetch-keys https://developer.download.nvidia.com/compute/cuda/repos/ubuntu2004/x86_64/3bf863cc.pub | |
| sudo add-apt-repository "deb http://developer.download.nvidia.com/compute/cuda/repos/ubuntu2004/x86_64/ /" | |
| sudo apt-get install -y software-properties-common | |
| sudo add-apt-repository ppa:ginggs/deal.ii-9.4.0-backports | |
| sudo apt-get update | |
| sudo apt-get install -yq --no-install-recommends \ | |
| cuda-toolkit-11-0 \ | |
| libp4est-dev \ | |
| libopenmpi-dev \ | |
| llvm \ | |
| numdiff \ | |
| openmpi-bin \ | |
| libboost-all-dev | |
| - name: info | |
| run: | | |
| mpicc -v | |
| cmake --version | |
| - uses: actions/checkout@v3 | |
| with: | |
| repository: kokkos/kokkos | |
| ref: 3.7.00 | |
| path: kokkos | |
| - name: compile and install kokkos | |
| working-directory: kokkos | |
| run: | | |
| mkdir build | |
| cd build | |
| cmake -D BUILD_SHARED_LIBS=ON \ | |
| -D CMAKE_CXX_COMPILER=clang++ \ | |
| -D CMAKE_INSTALL_PREFIX=${GITHUB_WORKSPACE}/../kokkos-install \ | |
| -D Kokkos_ENABLE_CUDA=ON \ | |
| -D Kokkos_ARCH_VOLTA70=ON \ | |
| .. | |
| make install | |
| - name: configure deal.II | |
| run: | | |
| mkdir build | |
| cd build | |
| cmake -D CMAKE_BUILD_TYPE=Debug \ | |
| -D CMAKE_CXX_COMPILER=clang++ \ | |
| -D DEAL_II_FORCE_BUNDLED_BOOST=ON \ | |
| -D DEAL_II_CXX_FLAGS="-std=c++17" \ | |
| -D DEAL_II_EARLY_DEPRECATIONS=ON \ | |
| -D DEAL_II_WITH_CUDA="ON" \ | |
| -D DEAL_II_WITH_KOKKOS="ON" \ | |
| -D KOKKOS_DIR=${GITHUB_WORKSPACE}/../kokkos-install \ | |
| -D DEAL_II_WITH_MPI="ON" \ | |
| -D DEAL_II_MPI_WITH_DEVICE_SUPPORT="OFF" \ | |
| -D DEAL_II_WITH_P4EST="ON" \ | |
| -D DEAL_II_COMPONENT_EXAMPLES="ON" \ | |
| .. | |
| cat detailed.log | |
| - name: archive detailed.log | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: linux-cuda-clang-detailed.log | |
| path: build/detailed.log | |
| - name: build deal.II | |
| run: | | |
| cd build | |
| make VERBOSE=1 -j 2 | |
| - name: build CUDA tests | |
| run: | | |
| cd build | |
| make -j 2 setup_tests_cuda | |
| cd tests/cuda | |
| make -j2 compile_test_executables |