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Questions about patient manifold. #738

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SNOL2 opened this issue Aug 7, 2024 · 1 comment
Open

Questions about patient manifold. #738

SNOL2 opened this issue Aug 7, 2024 · 1 comment
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@SNOL2
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SNOL2 commented Aug 7, 2024

Hi, Thanks for this incredible framework! Although moscot is not specifically designed for this, I noticed that you mentioned the patient manifold in your manuscript. What are your thoughts on the sample-level OT problem (e.g., temporal problem) based on single cell genomics data? Thanks in advance!

@MUCDK MUCDK self-assigned this Aug 20, 2024
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MUCDK commented Dec 6, 2024

Hi @SNOL2 ,

Sorry for coming back to this so late, and thanks for your interest in moscot.

Do you mean by "OT problem based on single cell genomics data"? I guess this is what we made available via moscot. Are you referring to the thoughts about patient representation learning with OT (https://proceedings.mlr.press/v139/tong21a/tong21a.pdf)

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