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modernize tidy transcriptomics and genomics with dplyr > 1.0.0 and new tidyr #6

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stemangiola opened this issue Aug 15, 2023 · 5 comments · Fixed by stemangiola/tidyseurat#68
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enhancement New feature or request

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@stemangiola
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dplyr and tidyr have evolved in the past 2 years, and we need to update the front end of the tidy adapters

  • tidySummarizedExperiment
  • tidySingleCellExperiment
  • tidyseurat
  • tidySpatialExperiment
  • plyranges

with the new functions, for example, slice_*, etc..

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@stemangiola
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stemangiola commented Aug 19, 2023

@wvictor14 is doing slice for tidyseurat. @wvictor14 if you reply here. will be able to add you to the Assignees.

@stemangiola stemangiola added the enhancement New feature or request label Aug 19, 2023
@wvictor14
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sounds good!

@stemangiola
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sounds good!

You are officially on! Looking forward to receiving your PR.

@noriakis
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I would like to add slice_* functions to tidySingleCellExperiment, based on @wvictor14's implementation of tidyseurat. Could I proceed?

@stemangiola
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I would like to add slice_* functions to tidySingleCellExperiment, based on @wvictor14's implementation of tidyseurat. Could I proceed?

You are on!

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enhancement New feature or request
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3 participants