Added workflow_dispatch trigger for CI to enable manual run #147
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| name: CI | ||
| on: | ||
| # GitHub has started calling new repo's first branch "main" https://github.com/github/renaming | ||
| # The cookiecutter uses the "--initial-branch" flag when it runs git-init | ||
| workflow_dispatch: | ||
| push: | ||
| branches: | ||
| - "main" | ||
| pull_request: | ||
| branches: | ||
| - "main" | ||
| schedule: | ||
| # Weekly tests run on main by default: | ||
| # Scheduled workflows run on the latest commit on the default or base branch. | ||
| # (from https://help.github.com/en/actions/reference/events-that-trigger-workflows#scheduled-events-schedule) | ||
| - cron: "0 0 * * 0" | ||
| jobs: | ||
| test: | ||
| name: Test on ${{ matrix.os }}, Python ${{ matrix.python-version }} | ||
| runs-on: ${{ matrix.os }} | ||
| strategy: | ||
| matrix: | ||
| os: [macOS-latest, ubuntu-latest, windows-latest] | ||
| python-version: ["3.11", "3.12"] | ||
| steps: | ||
| - uses: actions/checkout@v4 | ||
| - name: Additional info about the build | ||
| shell: bash | ||
| run: | | ||
| uname -a | ||
| df -h | ||
| ulimit -a | ||
| {% if cookiecutter.dependency_source == 'Dependencies from pip only (no conda)' %} | ||
| - name: Set up Python ${{ matrix.python-version }} | ||
| uses: actions/setup-python@v4 | ||
| with: | ||
| python-version: ${{ matrix.python-version }} | ||
| - name: Testing Dependencies | ||
| shell: bash | ||
| run: | | ||
| python -m pip install -U pytest pytest-cov codecov | ||
| {% else %} | ||
| # More info on options: https://github.com/marketplace/actions/setup-micromamba | ||
| - uses: mamba-org/setup-micromamba@v1 | ||
| with: | ||
| environment-file: devtools/conda-envs/test_env.yaml | ||
| environment-name: test | ||
| {%- if cookiecutter.dependency_source == 'Prefer conda-forge with pip fallback' %} | ||
| condarc: | | ||
| channels: | ||
| - conda-forge | ||
| {%- elif cookiecutter.dependency_source == 'Prefer default anaconda channel with pip fallback' %} | ||
| condarc: | | ||
| channels: | ||
| - defaults | ||
| {%- endif %} | ||
| create-args: >- | ||
| python=${{ matrix.python-version }} | ||
| {% endif %} | ||
| - name: Install package | ||
| {%- if cookiecutter.dependency_source == 'Dependencies from pip only (no conda)' %} | ||
| shell: bash | ||
| run: | | ||
| python -m pip install . | ||
| {% else %} | ||
| # conda setup requires this special shell | ||
| shell: bash -l {0} | ||
| run: | | ||
| python -m pip install . --no-deps | ||
| micromamba list | ||
| {% endif %} | ||
| - name: Run tests | ||
| {%- if cookiecutter.dependency_source == 'Dependencies from pip only (no conda)' %} | ||
| shell: bash | ||
| {% else %} | ||
| # conda setup requires this special shell | ||
| shell: bash -l {0} | ||
| {%- endif %} | ||
| run: | | ||
| pytest -v --cov=polymerist --cov-report=xml --color=yes polymerist/tests/ | ||
| - name: CodeCov | ||
| uses: codecov/codecov-action@v1 | ||
| with: | ||
| file: ./coverage.xml | ||
| flags: unittests | ||
| name: codecov-${{ matrix.os }}-py${{ matrix.python-version }} | ||
