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Added provisional "minimal" conda reqs YAML for better versioning and…
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… cross-platform support
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timbernat committed Jul 19, 2024
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43 changes: 43 additions & 0 deletions devtools/conda-envs/polymerist-minimal.yml
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name: polymerist-minimal
channels:
- conda-forge
- openeye
dependencies:
# Basic Python dependencies
- python ==3.11.0
- pip
- jupyterlab

# Numerical libraries
- numpy
- pandas
- dgl >=1.0
- networkx

# MD engines
- openmm
- lammps
- mdtraj

# Molecule building
- mbuild
- rdkit

# Visualization
- pillow
- matplotlib
- ipywidgets ==8.0.4 # more recent versions don't work with Jupyter notebooks, for some reason
- py3Dmol
- nglview

# OpenFF stack
- openff-toolkit ~=0.16
- openff-interchange >=0.3.28
- openff-nagl

# Chemical database queries
- cirpy
- pubchempy
- chemspipy
- pip:
- espaloma-charge ==0.0.8

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