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Added provisional "minimal" conda reqs YAML for better versioning and…
… cross-platform support
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name: polymerist-minimal | ||
channels: | ||
- conda-forge | ||
- openeye | ||
dependencies: | ||
# Basic Python dependencies | ||
- python ==3.11.0 | ||
- pip | ||
- jupyterlab | ||
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# Numerical libraries | ||
- numpy | ||
- pandas | ||
- dgl >=1.0 | ||
- networkx | ||
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# MD engines | ||
- openmm | ||
- lammps | ||
- mdtraj | ||
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# Molecule building | ||
- mbuild | ||
- rdkit | ||
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# Visualization | ||
- pillow | ||
- matplotlib | ||
- ipywidgets ==8.0.4 # more recent versions don't work with Jupyter notebooks, for some reason | ||
- py3Dmol | ||
- nglview | ||
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# OpenFF stack | ||
- openff-toolkit ~=0.16 | ||
- openff-interchange >=0.3.28 | ||
- openff-nagl | ||
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# Chemical database queries | ||
- cirpy | ||
- pubchempy | ||
- chemspipy | ||
- pip: | ||
- espaloma-charge ==0.0.8 |