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feat: modulo[wip] #222

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feat: modulo[wip] #222

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tlambert03
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@joshmoore, here's the beginning of a modulo type

from ome_types.model import OME, modulo

m = modulo.ModuloAnnotation()
m.value.modulos.modulo_along_c = modulo.Modulo(
    type=modulo.ModuloType.ANGLE, start=0, end=360
)

ome = OME()
ome.structured_annotations.append(m)

print(ome.to_xml())
<OME xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.openmicroscopy.org/Schemas/OME/2016-06 http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd">
  <StructuredAnnotations>
    <XMLAnnotation xmlns:ns2="openmicroscopy.org/omero/dimension/modulo" ID="Annotation:0" xsi:type="ns2:ModuloAnnotation">
      <ns2:Value>
        <Modulo>
          <ns3:ModuloAlongC xmlns:ns3="http://www.openmicroscopy.org/Schemas/Additions/2011-09" Type="angle" Start="0" End="360"/>
        </Modulo>
      </ns2:Value>
    </XMLAnnotation>
  </StructuredAnnotations>
</OME>

as you can see, the namespaces are still a bit messed up... but it's a start

@codspeed-hq
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codspeed-hq bot commented Sep 24, 2023

CodSpeed Performance Report

Merging #222 will not alter performance

Comparing modulo (b3912e5) with main (6f3c6ee)

Summary

✅ 9 untouched benchmarks

@joshmoore
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This is great, thanks, @tlambert03! As I mentioned on Zulip, https://github.com/ome/bioformats/blob/bc1fcddd5329d900853d55c6f8378e9235a26a53/components/formats-api/src/loci/formats/Modulo.java#L39 is probably the best definition of truth for the moment. But if you have any other questions, @jburel, @dgault, @sbesson, and @melissalinkert can hopefully help us out.

@joshmoore
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seealso: ome/omero-cli-transfer#74

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codecov bot commented Dec 28, 2023

Codecov Report

Attention: 47 lines in your changes are missing coverage. Please review.

Comparison is base (6f3c6ee) 86.75% compared to head (b3912e5) 79.55%.

Files Patch % Lines
src/ome_types/model/modulo.py 0.00% 46 Missing ⚠️
src/ome_types/_mixins/_collections.py 85.71% 1 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main     #222      +/-   ##
==========================================
- Coverage   86.75%   79.55%   -7.20%     
==========================================
  Files          24       25       +1     
  Lines        1200     1252      +52     
==========================================
- Hits         1041      996      -45     
- Misses        159      256      +97     

☔ View full report in Codecov by Sentry.
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2 participants