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Add sample mask #896

Merged
merged 11 commits into from
May 15, 2024
Merged

Add sample mask #896

merged 11 commits into from
May 15, 2024

Commits on May 15, 2024

  1. Add sample mask

    @benjeffery
    benjeffery committed May 15, 2024
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  2. Flip sgkit mask polarity

    @benjeffery
    Ben Jeffery authored and benjeffery committed May 15, 2024
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  3. Add mask names

    @benjeffery
    benjeffery committed May 15, 2024
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  4. Fix sample masking error

    @benjeffery
    benjeffery committed May 15, 2024
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  5. Extra tests of sample matching to disk with mask

    @benjeffery
    benjeffery committed May 15, 2024
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  6. Remove dask sample matching

    @benjeffery
    benjeffery committed May 15, 2024
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  7. Remove slice_haplotypes

    @benjeffery
    benjeffery committed May 15, 2024
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  8. Use blocks to interate haplotypes

    @benjeffery
    Ben Jeffery authored and benjeffery committed May 15, 2024
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  9. Use less RAM when iterating haplotypes

    @benjeffery
    benjeffery committed May 15, 2024
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  10. Rename positive masks to _select

    @benjeffery
    benjeffery committed May 15, 2024
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  11. Move selects to init

    @benjeffery
    benjeffery committed May 15, 2024
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