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@benjeffery benjeffery released this 26 May 12:02
· 362 commits to main since this release
0.2.1
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Minor Release

Bugfixes:

  • Fix a bug in the core LS matching algorithm in which the rate of recombination
    was being incorrectly computed (#493, #514, @jeromekelleher,
    @hyanwong).

  • tsinfer.verify() no longer requires that non-ancestral alleles in a SampleData
    and Tree Sequence file are in the same order (#490, #492,
    @hyanwong).

New Features:

  • Inferred ancestral haplotypes may be truncated via
    AncestorData.truncate_ancestors() to improve performance when inferring large
    datasets (#276, #467, @awohns).

Breaking changes:

  • tsinfer now requires Python 3.7
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