build-docs #3396
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name: Build and deploy site | |
on: | |
repository_dispatch: | |
schedule: | |
- cron: '29 11 * * *' | |
pull_request: | |
push: | |
branches: [main] | |
jobs: | |
cancel-superseded: | |
name: Cancel superseded | |
runs-on: ubuntu-latest | |
steps: | |
- name: Cancel Previous Runs | |
uses: styfle/[email protected] | |
with: | |
access_token: ${{ github.token }} | |
build-core-site: | |
needs: cancel-superseded | |
name: Build core site | |
runs-on: ubuntu-22.04 | |
steps: | |
- name: Cancel Previous Runs | |
uses: styfle/[email protected] | |
with: | |
access_token: ${{ github.token }} | |
- name: Checkout | |
uses: actions/checkout@v3 | |
- name: Set up Ruby 2.7 | |
uses: ruby/setup-ruby@v1 | |
with: | |
ruby-version: '2.7' | |
bundler-cache: true # runs 'bundle install' and caches installed gems automatically | |
- uses: actions/setup-node@v3 | |
with: | |
node-version: 14 | |
cache: 'npm' | |
- name: Install deps | |
run: npm ci | |
- name: Build site | |
run: GITHUB_TOKEN=${{ github.token }} grunt build | |
- name: Debug | |
run: | | |
cat Gemfile.lock | |
bundle info jekyll | |
bundle info jekyll-theme-cayman | |
ls | |
cat dist/index.html | |
- name: Upload built site | |
uses: actions/upload-artifact@v4 | |
with: | |
name: core-site | |
path: dist/* | |
build-msprime-docs: | |
name: Build msprime docs | |
needs: cancel-superseded | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v2 | |
name: Checkout msprime | |
with: | |
ref: main | |
repository: tskit-dev/msprime | |
submodules: true | |
fetch-depth: 0 # Needed for setuptools_scm to work correctly | |
- name: Get commit SHA1 for cache | |
run: git rev-parse HEAD > SHA1 | |
- uses: actions/cache@v2 | |
id: docs-cache | |
name: Docs cache | |
with: | |
path: dist | |
key: msprime-docs-v11-${{ hashFiles('SHA1') }} | |
- name: Install GSL | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: sudo apt-get install -y libgsl0-dev | |
- uses: actions/setup-python@v2 | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
name: Setup Python | |
with: | |
python-version: "3.10" | |
- name: Build virtualenv | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: python -m venv venv-latest | |
- name: Install deps | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
venv-latest/bin/activate && pip install -r requirements/CI-docs/requirements.txt | |
- name: Build C module | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: venv-latest/bin/activate && make | |
- name: Build Latest Docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
venv-latest/bin/activate | |
cd docs | |
make dist | |
# make dist changes the _conf.yml file to write the version number, so drop the change | |
git checkout . | |
- name: Copy docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
mkdir -p dist | |
cp -r docs/_build/html dist/latest | |
- name: Checkout latest stable tag | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
git fetch --tags --recurse-submodules=no | |
git checkout `git tag --list --sort=creatordate | grep -vi "[baC]" | tail -n1` | |
git submodule update --init --recursive | |
git status | |
# - name: Build virtualenv | |
# if: steps.docs-cache.outputs.cache-hit != 'true' | |
# run: python -m venv venv-stable | |
# | |
# - name: Install deps | |
# if: steps.docs-cache.outputs.cache-hit != 'true' | |
# run: | | |
# venv-stable/bin/activate | |
# [ -f requirements/CI-docs/requirements.txt ] && pip install -r requirements/CI-docs/requirements.txt | |
# [ -f requirements/development.txt ] && pip install -r requirements/development.txt | |
- name: Build C module | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: venv-latest/bin/activate && make | |
- name: Build Stable Docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
rm -rf docs/_build | |
venv-latest/bin/activate | |
cd docs | |
make dist | |
# make dist changes the _conf.yml file to write the version number, so drop the change | |
git checkout . | |
- name: Copy docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | |
cp -r docs/_build/html dist/stable | |
- name: Upload msprime docs | |
uses: actions/upload-artifact@v4 | |
with: | |
name: msprime-docs | |
path: dist/* | |
build-tsinfer-docs: | |
name: Build tsinfer docs | |
needs: cancel-superseded | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v2 | |
name: Checkout tsinfer | |
with: | |
ref: main | |
repository: tskit-dev/tsinfer | |
submodules: true | |
fetch-depth: 0 # Needed for setuptools_scm to work correctly | |
- name: Get commit SHA1 for cache | |
run: git rev-parse HEAD > SHA1 | |
- uses: actions/cache@v2 | |
id: docs-cache | |
name: Docs cache | |
with: | |
path: dist | |
key: tsinfer-docs-v1-${{ hashFiles('SHA1') }} | |
- uses: actions/setup-python@v4 | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
name: Setup Python | |
with: | |
python-version: "3.10" | |
- name: Build virtualenv | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: python -m venv venv-latest | |
- name: Install deps | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
venv-latest/bin/activate && pip install -r requirements/CI-docs/requirements.txt | |
sudo apt-get install tabix | |
- name: Build C module | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: venv-latest/bin/activate && make | |
- name: Build Latest Docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
venv-latest/bin/activate | |
cd docs | |
make dist | |
# make dist changes the _conf.yml file to write the version number, so drop the change | |
git checkout . | |
- name: Copy docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
mkdir -p dist | |
cp -r docs/_build/html dist/latest | |
- name: Checkout latest stable tag | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
git fetch --tags --recurse-submodules=no | |
git checkout `git tag --list --sort=creatordate | grep -vi "[baC]" | tail -n1` | |
git submodule update --init --recursive | |
git status | |
- uses: actions/setup-python@v4 | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
name: Setup Python | |
with: | |
python-version: "3.10" | |
- name: Build virtualenv | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: python -m venv venv-stable | |
- name: Install deps | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
venv-stable/bin/activate | |
[ -f requirements/CI-docs/requirements.txt ] && pip install -r requirements/CI-docs/requirements.txt | |
- name: Build C module | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
venv-latest/bin/activate && make | |
- name: Build Stable Docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
rm -rf docs/_build | |
venv-latest/bin/activate | |
cd docs | |
make dist | |
# make dist changes the _conf.yml file to write the version number, so drop the change | |
git checkout . | |
- name: Copy docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | |
cp -r docs/_build/html dist/stable | |
- name: Upload tsinfer docs | |
uses: actions/upload-artifact@v4 | |
with: | |
name: tsinfer-docs | |
path: dist/* | |
build-tskit-docs: | |
name: Build tskit docs | |
needs: cancel-superseded | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v2 | |
name: Checkout tskit | |
with: | |
ref: main | |
repository: tskit-dev/tskit | |
submodules: true | |
fetch-depth: 0 # Needed for setuptools_scm to work correctly | |
- name: Get commit SHA1 for cache | |
run: git rev-parse HEAD > SHA1 | |
- uses: actions/cache@v2 | |
id: docs-cache | |
name: Docs cache | |
with: | |
path: dist | |
key: tskit-docs-v7-${{ hashFiles('SHA1') }} | |
- uses: actions/setup-python@v4 | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
name: Setup Python | |
with: | |
python-version: "3.10" | |
- name: Build virtualenv | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: python -m venv venv-latest | |
- name: Install deps | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
sudo apt-get install doxygen | |
venv-latest/bin/activate && pip install -r python/requirements/CI-docs/requirements.txt | |
- name: Build C module | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: venv-latest/bin/activate && make -C python | |
- name: Build Latest Docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
venv-latest/bin/activate | |
cd docs | |
make dist | |
- name: Copy docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
mkdir -p dist | |
cp -r docs/_build/html dist/latest | |
- name: Checkout latest stable tag | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
git stash | |
git fetch --tags --recurse-submodules=no | |
git checkout `git tag --list --sort=creatordate | grep -vi "[baC]" | tail -n1` | |
git submodule update --init --recursive | |
git status | |
- uses: actions/setup-python@v4 | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
name: Setup Python | |
with: | |
python-version: "3.10" | |
- name: Build virtualenv | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: python -m venv venv-stable | |
- name: Downgrade pip (for conflicting dependencies) | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: venv-stable/bin/activate && pip install pip==20.0.2 | |
- name: Install deps | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
# Remove this second line after next release of tskit | |
run: | | |
venv-stable/bin/activate && pip install -r python/requirements/CI-docs/requirements.txt | |
venv-stable/bin/activate && pip install nbclient==0.5.13 | |
- name: Build C module | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: venv-stable/bin/activate && make -C python | |
- name: Build Stable Docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
rm -rf docs/_build | |
venv-stable/bin/activate | |
# Install jsonschema for bugfix | |
pip install jsonschema[format-nongpl]==4.17.3 | |
cd docs | |
# A sphinx-book-theme breaking change needs this | |
sed -i '/html_theme_options:/a\ \ \ \ \ \ \ \ navigation_with_keys: False' _config.yml | |
make dist || make | |
- name: Copy docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
cp -r docs/_build/html dist/stable | |
- name: Upload tskit docs | |
uses: actions/upload-artifact@v4 | |
with: | |
name: tskit-docs | |
path: dist/* | |
build-pyslim-docs: | |
name: Build pyslim docs | |
needs: cancel-superseded | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v2 | |
name: Checkout pyslim | |
with: | |
ref: main | |
repository: tskit-dev/pyslim | |
submodules: true | |
fetch-depth: 0 # Needed for setuptools_scm to work correctly | |
- name: Get commit SHA1 for cache | |
run: git rev-parse HEAD > SHA1 | |
- uses: actions/cache@v2 | |
id: docs-cache | |
name: Docs cache | |
with: | |
path: dist | |
key: pyslim-docs-v6-${{ hashFiles('SHA1') }} | |
- uses: actions/setup-python@v2 | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
name: Setup Python | |
with: | |
python-version: "3.10" | |
- name: Build latest SLiM | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
git clone https://github.com/messerlab/SLiM.git | |
mkdir -p SLiM/Release | |
cd SLiM/Release | |
cmake -D CMAKE_BUILD_TYPE=Release .. | |
make -j 2 | |
- name: Build virtualenv | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: python -m venv venv-latest | |
- name: Install deps | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
venv-latest/bin/activate | |
pip install -r requirements/CI-docs/requirements.txt | |
- name: Build Latest Docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
venv-latest/bin/activate | |
export PATH=$PATH:$PWD/SLiM/Release | |
cd docs | |
# don't re-generate these which require tricky prerequisites (inkscape, xmlstarlet) | |
touch _static/{pedigree0.svg,pedigree1.svg,pedigree2.svg,pedigree_recapitate.svg,pedigree_simplify.svg,pedigree_mutate.svg} | |
touch _static/{pedigree01.png,pedigree0.png,pedigree1.png,pedigree2.png,pedigree_recapitate.png,pedigree_simplify.png,pedigree_mutate.png} | |
make dist | |
# make dist changes the _conf.yml file to write the version number, so drop the change | |
git checkout . | |
- name: Copy docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
mkdir -p dist | |
cp -r docs/_build/html dist/latest | |
- name: Build stable SLiM | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
mkdir -p SLiM/Stable | |
cd SLiM/Stable | |
git fetch --tags --recurse-submodules=no | |
git checkout `git tag --list --sort=creatordate | grep -vi "[baC]" | tail -n1` | |
git status | |
cmake -D CMAKE_BUILD_TYPE=Release .. | |
make -j 2 | |
- name: Checkout latest stable tag | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
git fetch --tags --recurse-submodules=no | |
git checkout `git tag --list --sort=creatordate | grep -vi "[baC]" | tail -n1` | |
git submodule update --init --recursive | |
git status | |
# As docs build has had issues with dependancies, just use venv-latest for now | |
# - name: Build virtualenv | |
# if: steps.docs-cache.outputs.cache-hit != 'true' | |
# run: python -m venv venv-stable | |
# | |
# - name: Install deps | |
# if: steps.docs-cache.outputs.cache-hit != 'true' | |
# run: | | |
# venv-stable/bin/activate | |
# pip install -r requirements/CI-docs/requirements.txt | |
- name: Build Stable Docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
rm -rf docs/_build | |
venv-latest/bin/activate | |
export PATH=$PWD/SLiM/Stable:$PATH | |
cd docs | |
# A sphinx-book-theme breaking change needs this | |
sed -i '/html_theme_options:/a\ \ \ \ \ navigation_with_keys: False' _config.yml | |
# don't re-generate these which require tricky prerequisites (inkscape, xmlstarlet) | |
touch _static/{pedigree0.svg,pedigree1.svg,pedigree2.svg,pedigree_recapitate.svg,pedigree_simplify.svg,pedigree_mutate.svg} | |
touch _static/{pedigree01.png,pedigree0.png,pedigree1.png,pedigree2.png,pedigree_recapitate.png,pedigree_simplify.png,pedigree_mutate.png} | |
make dist | |
# make dist changes the _conf.yml file to write the version number, so drop the change | |
git checkout . | |
- name: Copy docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | |
cp -r docs/_build/html dist/stable | |
- name: Upload pyslim docs | |
uses: actions/upload-artifact@v4 | |
with: | |
name: pyslim-docs | |
path: dist/* | |
build-tstrait-docs: | |
name: Build tstrait docs | |
needs: cancel-superseded | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v2 | |
name: Checkout tstrait | |
with: | |
ref: main | |
repository: tskit-dev/tstrait | |
- name: Get commit SHA1 for cache | |
run: git rev-parse HEAD > SHA1 | |
- uses: actions/cache@v2 | |
id: docs-cache | |
name: Docs cache | |
with: | |
path: dist | |
key: tstrait-docs-v3-${{ hashFiles('SHA1') }} | |
- uses: actions/setup-python@v2 | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
name: Setup Python | |
with: | |
python-version: "3.10" | |
- name: Build virtualenv | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: python -m venv venv-latest | |
- name: Install deps | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
venv-latest/bin/activate && pip install -r requirements/CI-docs/requirements.txt | |
- name: Build Latest Docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
venv-latest/bin/activate | |
cd docs | |
make dist | |
# make dist changes the _conf.yml file to write the version number, so drop the change | |
git checkout . | |
- name: Copy docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
mkdir -p dist | |
cp -r docs/_build/html dist/latest | |
- name: Checkout latest stable tag | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
git fetch --tags --recurse-submodules=no | |
git checkout `git tag --list --sort=creatordate | grep -vi "[baC]" | tail -n1` | |
git status | |
- name: Build Stable Docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
rm -rf docs/_build | |
venv-latest/bin/activate | |
cd docs | |
make dist | |
# make dist changes the _conf.yml file to write the version number, so drop the change | |
git checkout . | |
- name: Copy docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | |
cp -r docs/_build/html dist/stable | |
- name: Upload tstrait docs | |
uses: actions/upload-artifact@v4 | |
with: | |
name: tstrait-docs | |
path: dist/* | |
build-tsdate-docs: | |
name: Build tsdate docs | |
needs: cancel-superseded | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v2 | |
name: Checkout tsdate | |
with: | |
ref: main | |
repository: tskit-dev/tsdate | |
- name: Get commit SHA1 for cache | |
run: git rev-parse HEAD > SHA1 | |
- uses: actions/cache@v2 | |
id: docs-cache | |
name: Docs cache | |
with: | |
path: dist | |
key: tsdate-docs-v2-${{ hashFiles('SHA1') }} | |
- uses: actions/setup-python@v2 | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
name: Setup Python | |
with: | |
python-version: "3.10" | |
- name: Build virtualenv | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: python -m venv venv-latest | |
- name: Install deps | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
venv-latest/bin/activate && pip install -r docs/requirements.txt | |
- name: Build Latest Docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
venv-latest/bin/activate | |
cd docs | |
make dist | |
# make dist changes the _conf.yml file to write the version number, so drop the change | |
git checkout . | |
- name: Copy docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
mkdir -p dist | |
cp -r docs/_build/html dist/latest | |
- name: Checkout latest stable tag | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
git fetch --tags --recurse-submodules=no | |
git checkout `git tag --list --sort=creatordate | grep -vi "[baC]" | tail -n1` | |
git status | |
- name: Build Stable Docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
rm -rf docs/_build | |
venv-latest/bin/activate | |
python -m pip install "numpy<2" | |
cd docs | |
make dist | |
# make dist changes the _conf.yml file to write the version number, so drop the change | |
git checkout . | |
- name: Copy docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | |
cp -r docs/_build/html dist/stable | |
- name: Upload tsdate docs | |
uses: actions/upload-artifact@v4 | |
with: | |
name: tsdate-docs | |
path: dist/* | |
build-tszip-docs: | |
name: Build tszip docs | |
needs: cancel-superseded | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v2 | |
name: Checkout tszip | |
with: | |
ref: main | |
repository: tskit-dev/tszip | |
- name: Get commit SHA1 for cache | |
run: git rev-parse HEAD > SHA1 | |
- uses: actions/cache@v2 | |
id: docs-cache | |
name: Docs cache | |
with: | |
path: dist | |
key: tszip-docs-v2-${{ hashFiles('SHA1') }} | |
- uses: actions/setup-python@v2 | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
name: Setup Python | |
with: | |
python-version: "3.10" | |
- name: Build virtualenv | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: python -m venv venv-latest | |
- name: Install deps | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
venv-latest/bin/activate && pip install -r requirements/CI-docs.txt | |
- name: Build Latest Docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
venv-latest/bin/activate | |
cd docs | |
make dist | |
# make dist changes the _conf.yml file to write the version number, so drop the change | |
git checkout . | |
- name: Copy docs | |
if: steps.docs-cache.outputs.cache-hit != 'true' | |
run: | | |
mkdir -p dist | |
cp -r docs/_build/html dist/latest | |
# Disabled until next tszip release - also reinstate redirect on line 917 | |
# - name: Checkout latest stable tag | |
# if: steps.docs-cache.outputs.cache-hit != 'true' | |
# run: | | |
# git fetch --tags --recurse-submodules=no | |
# git checkout `git tag --list --sort=creatordate | grep -vi "[baC]" | tail -n1` | |
# git status | |
# | |
# - name: Build Stable Docs | |
# if: steps.docs-cache.outputs.cache-hit != 'true' | |
# run: | | |
# rm -rf docs/_build | |
# venv-latest/bin/activate | |
# cd docs | |
# make dist | |
# # make dist changes the _conf.yml file to write the version number, so drop the change | |
# git checkout . | |
# | |
# - name: Copy docs | |
# if: steps.docs-cache.outputs.cache-hit != 'true' | |
# run: | |
# cp -r docs/_build/html dist/stable | |
- name: Upload tszip docs | |
uses: actions/upload-artifact@v4 | |
with: | |
name: tszip-docs | |
path: dist/* | |
import-tutorials: | |
name: Import tutorials | |
needs: cancel-superseded | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v2 | |
name: Checkout tutorials | |
with: | |
ref: gh-pages | |
repository: tskit-dev/tutorials | |
- name: Upload tutorials | |
uses: actions/upload-artifact@v4 | |
with: | |
name: tutorials | |
path: . | |
import-rust-tutorial: | |
name: Import rust tutorials | |
needs: cancel-superseded | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v2 | |
name: Checkout tutorials | |
with: | |
ref: gh-pages | |
repository: tskit-dev/tskit-rust | |
- name: Upload tutorials | |
uses: actions/upload-artifact@v4 | |
with: | |
name: rust-tutorials | |
path: . | |
deploy: | |
name: Deploy 🚀 (if on main branch) | |
needs: | |
- build-core-site | |
- build-msprime-docs | |
- build-tsinfer-docs | |
- build-tskit-docs | |
- build-pyslim-docs | |
- build-tsdate-docs | |
- build-tszip-docs | |
- build-tstrait-docs | |
- import-tutorials | |
- import-rust-tutorial | |
runs-on: ubuntu-latest | |
steps: | |
- name: Download core site | |
uses: actions/download-artifact@v4 | |
with: | |
name: core-site | |
path: site | |
- name: Download msprime-docs | |
uses: actions/download-artifact@v4 | |
with: | |
name: msprime-docs | |
path: site/msprime/docs | |
- name: Download tsinfer-docs | |
uses: actions/download-artifact@v4 | |
with: | |
name: tsinfer-docs | |
path: site/tsinfer/docs | |
- name: Download tskit-docs | |
uses: actions/download-artifact@v4 | |
with: | |
name: tskit-docs | |
path: site/tskit/docs | |
- name: Download tstrait-docs | |
uses: actions/download-artifact@v4 | |
with: | |
name: tstrait-docs | |
path: site/tstrait/docs | |
- name: Download pyslim-docs | |
uses: actions/download-artifact@v4 | |
with: | |
name: pyslim-docs | |
path: site/pyslim/docs | |
- name: Download tsdate-docs | |
uses: actions/download-artifact@v4 | |
with: | |
name: tsdate-docs | |
path: site/tsdate/docs | |
- name: Download tszaip-docs | |
uses: actions/download-artifact@v4 | |
with: | |
name: tszip-docs | |
path: site/tszip/docs | |
- name: Download tutorials | |
uses: actions/download-artifact@v4 | |
with: | |
name: tutorials | |
path: site/tutorials | |
- name: Download rust tutorial | |
uses: actions/download-artifact@v4 | |
with: | |
name: rust-tutorials | |
path: site/tutorials/rust | |
- name: Pages config and tweaks | |
run: | | |
touch site/.nojekyll | |
echo "tskit.dev" > site/CNAME | |
echo "<meta http-equiv=\"Refresh\" content=\"0; url=/msprime/docs/stable\" />" > site/msprime/docs/index.html | |
echo "<meta http-equiv=\"Refresh\" content=\"0; url=/tsinfer/docs/stable\" />" > site/tsinfer/docs/index.html | |
echo "<meta http-equiv=\"Refresh\" content=\"0; url=/tskit/docs/stable\" />" > site/tskit/docs/index.html | |
echo "<meta http-equiv=\"Refresh\" content=\"0; url=/pyslim/docs/stable\" />" > site/pyslim/docs/index.html | |
echo "<meta http-equiv=\"Refresh\" content=\"0; url=/tstrait/docs/stable\" />" > site/tstrait/docs/index.html | |
echo "<meta http-equiv=\"Refresh\" content=\"0; url=/tsdate/docs/stable\" />" > site/tsdate/docs/index.html | |
echo "<meta http-equiv=\"Refresh\" content=\"0; url=/tszip/docs/latest\" />" > site/tszip/docs/index.html | |
- name: List site contents | |
run: | | |
ls -R | |
- name: Upload site (for PR inspection) | |
uses: actions/upload-artifact@v4 | |
with: | |
name: site | |
path: . | |
- name: Deploy | |
if: github.ref == 'refs/heads/main' | |
uses: JamesIves/[email protected] | |
with: | |
GITHUB_TOKEN: ${{ secrets.ADMINBOT_TOKEN }} | |
BRANCH: gh-pages | |
FOLDER: site | |
SINGLE_COMMIT: true |