Merge pull request #27 from unipept/tryptic-search #187
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| on: push | |
| name: Coverage | |
| jobs: | |
| coverage: | |
| name: Codecov | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: recursive | |
| - name: Install minimal nightly toolchain | |
| uses: actions-rs/toolchain@v1 | |
| with: | |
| profile: minimal | |
| toolchain: nightly | |
| override: true | |
| - name: Run cargo test (bitarray) | |
| uses: actions-rs/cargo@v1 | |
| with: | |
| command: test | |
| args: --all-features --no-fail-fast -p bitarray | |
| env: | |
| CARGO_INCREMENTAL: 0 | |
| RUSTFLAGS: '-Zprofile -Ccodegen-units=1 -Cinline-threshold=0 -Clink-dead-code -Coverflow-checks=off -Cpanic=abort -Zpanic_abort_tests' | |
| RUSTDOCFLAGS: '-Zprofile -Ccodegen-units=1 -Cinline-threshold=0 -Clink-dead-code -Coverflow-checks=off -Cpanic=abort -Zpanic_abort_tests' | |
| - name: Gather coverage information (bitarray) | |
| id: coverage-bitarray | |
| uses: actions-rs/[email protected] | |
| - name: Upload coverage reports to Codecov (bitarray) | |
| uses: codecov/[email protected] | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| file: ${{ steps.coverage-bitarray.outputs.report }} | |
| flags: bitarray | |
| verbose: true | |
| fail_ci_if_error: true | |
| - name: Run cargo test (fa-compression) | |
| uses: actions-rs/cargo@v1 | |
| with: | |
| command: test | |
| args: --all-features --no-fail-fast -p fa-compression | |
| env: | |
| CARGO_INCREMENTAL: 0 | |
| RUSTFLAGS: '-Zprofile -Ccodegen-units=1 -Cinline-threshold=0 -Clink-dead-code -Coverflow-checks=off -Cpanic=abort -Zpanic_abort_tests' | |
| RUSTDOCFLAGS: '-Zprofile -Ccodegen-units=1 -Cinline-threshold=0 -Clink-dead-code -Coverflow-checks=off -Cpanic=abort -Zpanic_abort_tests' | |
| - name: Gather coverage information (fa-compression) | |
| id: coverage-fa-compression | |
| uses: actions-rs/[email protected] | |
| - name: Upload coverage reports to Codecov (fa-compression) | |
| uses: codecov/[email protected] | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| file: ${{ steps.coverage-fa-compression.outputs.report }} | |
| flags: fa-compression | |
| verbose: true | |
| fail_ci_if_error: true | |
| - name: Run cargo test (sa-builder) | |
| uses: actions-rs/cargo@v1 | |
| with: | |
| command: test | |
| args: --all-features --no-fail-fast -p sa-builder | |
| env: | |
| CARGO_INCREMENTAL: 0 | |
| RUSTFLAGS: '-Zprofile -Ccodegen-units=1 -Cinline-threshold=0 -Clink-dead-code -Coverflow-checks=off -Cpanic=abort -Zpanic_abort_tests' | |
| RUSTDOCFLAGS: '-Zprofile -Ccodegen-units=1 -Cinline-threshold=0 -Clink-dead-code -Coverflow-checks=off -Cpanic=abort -Zpanic_abort_tests' | |
| - name: Gather coverage information (sa-builder) | |
| id: coverage-sa-builder | |
| uses: actions-rs/[email protected] | |
| - name: Upload coverage reports to Codecov (sa-builder) | |
| uses: codecov/[email protected] | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| file: ${{ steps.coverage-sa-builder.outputs.report }} | |
| flags: sa-builder | |
| verbose: true | |
| fail_ci_if_error: true | |
| - name: Run cargo test (sa-compression) | |
| uses: actions-rs/cargo@v1 | |
| with: | |
| command: test | |
| args: --all-features --no-fail-fast -p sa-compression | |
| env: | |
| CARGO_INCREMENTAL: 0 | |
| RUSTFLAGS: '-Zprofile -Ccodegen-units=1 -Cinline-threshold=0 -Clink-dead-code -Coverflow-checks=off -Cpanic=abort -Zpanic_abort_tests' | |
| RUSTDOCFLAGS: '-Zprofile -Ccodegen-units=1 -Cinline-threshold=0 -Clink-dead-code -Coverflow-checks=off -Cpanic=abort -Zpanic_abort_tests' | |
| - name: Gather coverage information (sa-compression) | |
| id: coverage-sa-compression | |
| uses: actions-rs/[email protected] | |
| - name: Upload coverage reports to Codecov (sa-compression) | |
| uses: codecov/[email protected] | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| file: ${{ steps.coverage-sa-compression.outputs.report }} | |
| flags: sa-compression | |
| verbose: true | |
| fail_ci_if_error: true | |
| - name: Run cargo test (sa-index) | |
| uses: actions-rs/cargo@v1 | |
| with: | |
| command: test | |
| args: --all-features --no-fail-fast -p sa-index | |
| env: | |
| CARGO_INCREMENTAL: 0 | |
| RUSTFLAGS: '-Zprofile -Ccodegen-units=1 -Cinline-threshold=0 -Clink-dead-code -Coverflow-checks=off -Cpanic=abort -Zpanic_abort_tests' | |
| RUSTDOCFLAGS: '-Zprofile -Ccodegen-units=1 -Cinline-threshold=0 -Clink-dead-code -Coverflow-checks=off -Cpanic=abort -Zpanic_abort_tests' | |
| - name: Gather coverage information (sa-index) | |
| id: coverage-sa-index | |
| uses: actions-rs/[email protected] | |
| - name: Upload coverage reports to Codecov (sa-index) | |
| uses: codecov/[email protected] | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| file: ${{ steps.coverage-sa-index.outputs.report }} | |
| flags: sa-index | |
| verbose: true | |
| fail_ci_if_error: true | |
| - name: Run cargo test (sa-mappings) | |
| uses: actions-rs/cargo@v1 | |
| with: | |
| command: test | |
| args: --all-features --no-fail-fast -p sa-mappings | |
| env: | |
| CARGO_INCREMENTAL: 0 | |
| RUSTFLAGS: '-Zprofile -Ccodegen-units=1 -Cinline-threshold=0 -Clink-dead-code -Coverflow-checks=off -Cpanic=abort -Zpanic_abort_tests' | |
| RUSTDOCFLAGS: '-Zprofile -Ccodegen-units=1 -Cinline-threshold=0 -Clink-dead-code -Coverflow-checks=off -Cpanic=abort -Zpanic_abort_tests' | |
| - name: Gather coverage information (sa-mappings) | |
| id: coverage-sa-mappings | |
| uses: actions-rs/[email protected] | |
| - name: Upload coverage reports to Codecov (sa-mappings) | |
| uses: codecov/[email protected] | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| file: ${{ steps.coverage-sa-mappings.outputs.report }} | |
| flags: sa-mappings | |
| verbose: true | |
| fail_ci_if_error: true |