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aggregation (#18)
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Aggregation for taxonomy, functionality and proteins
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tibvdm authored Apr 8, 2024
1 parent f77a286 commit 3366c02
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Showing 9 changed files with 1,495 additions and 12 deletions.
27 changes: 25 additions & 2 deletions .github/workflows/coverage.yml
Original file line number Diff line number Diff line change
Expand Up @@ -28,14 +28,37 @@ jobs:
RUSTDOCFLAGS: '-Zprofile -Ccodegen-units=1 -Cinline-threshold=0 -Clink-dead-code -Coverflow-checks=off -Cpanic=abort -Zpanic_abort_tests'

- name: Gather coverage information (fa-compression)
id: coverage
id: coverage-fa-compression
uses: actions-rs/[email protected]

- name: Upload coverage reports to Codecov (fa-compression)
uses: codecov/[email protected]
with:
token: ${{ secrets.CODECOV_TOKEN }}
file: ${{ steps.coverage.outputs.report }}
file: ${{ steps.coverage-fa-compression.outputs.report }}
flags: fa-compression
verbose: true
fail_ci_if_error: true

- name: Run cargo test (sa-mappings)
uses: actions-rs/cargo@v1
with:
command: test
args: --all-features --no-fail-fast -p sa-mappings
env:
CARGO_INCREMENTAL: 0
RUSTFLAGS: '-Zprofile -Ccodegen-units=1 -Cinline-threshold=0 -Clink-dead-code -Coverflow-checks=off -Cpanic=abort -Zpanic_abort_tests'
RUSTDOCFLAGS: '-Zprofile -Ccodegen-units=1 -Cinline-threshold=0 -Clink-dead-code -Coverflow-checks=off -Cpanic=abort -Zpanic_abort_tests'

- name: Gather coverage information (sa-mappings)
id: coverage-sa-mappings
uses: actions-rs/[email protected]

- name: Upload coverage reports to Codecov (sa-mappings)
uses: codecov/[email protected]
with:
token: ${{ secrets.CODECOV_TOKEN }}
file: ${{ steps.coverage-sa-mappings.outputs.report }}
flags: sa-mappings
verbose: true
fail_ci_if_error: true
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