build(nix): base flake.nix was failing on pylint

Using _data/python-pfhub/.loca for local python installs.
usnistgov · Aug 13, 2023 · bb69614 · bb69614
1 parent e0e6491
commit bb69614
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Showing 4 changed files with 15 additions and 9 deletions.
diff --git a/_data/python-pfhub/flake.lock b/_data/python-pfhub/flake.lock
diff --git a/_data/python-pfhub/flake.nix b/_data/python-pfhub/flake.nix
@@ -28,6 +28,7 @@
         ];
 
         propagatedBuildInputs = with pypkgs; [
+          pythonRelaxDepsHook
           pyother.zenodo_client
           numpy
           pytest
@@ -91,9 +92,13 @@
 
       pfhubdev = (pfhub.overridePythonAttrs (old: rec {
 
+        pythonRemoveDeps = [
+          "linkml"
+        ];
+
         propagatedBuildInputs = old.propagatedBuildInputs ++ extra;
 
-        nativeBuildInputs = propagatedBuildInputs;# ++ extra;
+        nativeBuildInputs = [ pypkgs.pythonRelaxDepsHook ] ++ propagatedBuildInputs;# ++ extra;
 
         PIP_DISABLE_PIP_VERSION_CHECK = true;
 

diff --git a/flake.lock b/flake.lock
diff --git a/flake.nix b/flake.nix
@@ -42,6 +42,7 @@
           notebook
           ipykernel
           pykwalify
+          pip
         ];
       };
 
@@ -58,7 +59,7 @@
         shellHook = ''
 
           SOURCE_DATE_EPOCH=$(date +%s)
-          export PYTHONUSERBASE=$PWD/.local
+          export PYTHONUSERBASE=$PWD/_data/python-pfhub/.local
           export USER_SITE=`python -c "import site; print(site.USER_SITE)"`
           export PYTHONPATH=$PYTHONPATH:$USER_SITE:$(pwd)
           export PATH=$PATH:$PYTHONUSERBASE/bin