Skip to content

Commit

Permalink
Hourly export update
Browse files Browse the repository at this point in the history
  • Loading branch information
actions-user committed Oct 19, 2024
1 parent 9130f63 commit 626182a
Show file tree
Hide file tree
Showing 17 changed files with 2,260 additions and 16 deletions.
188 changes: 187 additions & 1 deletion bugsigdb_signatures_genus_metaphlan.gmt

Large diffs are not rendered by default.

176 changes: 175 additions & 1 deletion bugsigdb_signatures_genus_metaphlan_exact.gmt

Large diffs are not rendered by default.

188 changes: 187 additions & 1 deletion bugsigdb_signatures_genus_ncbi.gmt

Large diffs are not rendered by default.

176 changes: 175 additions & 1 deletion bugsigdb_signatures_genus_ncbi_exact.gmt

Large diffs are not rendered by default.

188 changes: 187 additions & 1 deletion bugsigdb_signatures_genus_taxname.gmt

Large diffs are not rendered by default.

176 changes: 175 additions & 1 deletion bugsigdb_signatures_genus_taxname_exact.gmt

Large diffs are not rendered by default.

248 changes: 247 additions & 1 deletion bugsigdb_signatures_mixed_metaphlan.gmt

Large diffs are not rendered by default.

248 changes: 247 additions & 1 deletion bugsigdb_signatures_mixed_ncbi.gmt

Large diffs are not rendered by default.

248 changes: 247 additions & 1 deletion bugsigdb_signatures_mixed_taxname.gmt

Large diffs are not rendered by default.

14 changes: 13 additions & 1 deletion bugsigdb_signatures_species_metaphlan.gmt
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
# BugSigDB 2024-10-19_02:21_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
# BugSigDB 2024-10-19_03:04_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
bsdb:1/1/1_Colorectal-adenoma:conventional-adenoma-cases_vs_controls_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lacticaseibacillus|s__Lacticaseibacillus zeae
bsdb:1/2/1_Hyperplastic-Polyp:hyperplastic-polyp-cases_vs_controls_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lacticaseibacillus|s__Lacticaseibacillus zeae
bsdb:1/6/1_Colorectal-adenoma:Non-advanced-conventional-adenoma-cases_vs_controls_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lacticaseibacillus|s__Lacticaseibacillus zeae
Expand Down Expand Up @@ -2067,6 +2067,18 @@ bsdb:1049/33/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_UP NA k__Bacteria|p__Ba
bsdb:1049/34/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus equorum k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus warneri
bsdb:1049/35/1_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus equorum k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus schleiferi k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus warneri
bsdb:1049/36/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_DOWN NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus warneri
bsdb:1049/37/1_Atopic-eczema:cADPre-dogs_vs_Healthy-dogs_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus aureus k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus equorum
bsdb:1049/37/2_Atopic-eczema:cADPre-dogs_vs_Healthy-dogs_DOWN NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus pseudintermedius
bsdb:1049/38/1_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus equorum k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus warneri
bsdb:1049/39/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus hominis
bsdb:1049/40/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Mammaliicoccus|s__Mammaliicoccus sciuri
bsdb:1049/40/2_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_DOWN NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus pseudintermedius
bsdb:1049/41/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus coagulans k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus pseudintermedius k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus schleiferi
bsdb:1049/42/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus warneri
bsdb:1049/43/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_DOWN NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus pseudintermedius
bsdb:1049/44/1_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus equorum
bsdb:1049/44/2_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_DOWN NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus epidermidis k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus hominis
bsdb:1049/45/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_DOWN NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus hominis
bsdb:1051/1/2_Lung-cancer:Lung-cancer-(L-group)_vs_Benign-pulmonary-diseases-(N-group)_DOWN NA k__Bacteria|p__Bacillota|c__Clostridia|o__Eubacteriales|f__Oscillospiraceae|g__Ruminococcus|s__Ruminococcus gauvreauii
bsdb:1052/1/1_Alzheimer's-disease:Alzheimer’s-Disease-(AD)_vs_Cognitively-normal-control-(NC)_UP NA k__Bacteria|p__Bacillota|c__Clostridia|o__Eubacteriales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium ventriosum k__Bacteria|p__Bacillota|c__Clostridia|o__Lachnospirales|f__Lachnospiraceae|s__Lachnospiraceae bacterium NC2004
bsdb:1054/1/1_Streptococcal-infection:GBS-culture-positive-pregnant-women_vs_GBS-culture-negative-pregnant-women_DOWN NA k__Bacteria|p__Bacillota|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus iners k__Bacteria|p__Bacillota|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Limosilactobacillus|s__Limosilactobacillus coleohominis
Expand Down
14 changes: 13 additions & 1 deletion bugsigdb_signatures_species_metaphlan_exact.gmt
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
# BugSigDB 2024-10-19_02:21_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
# BugSigDB 2024-10-19_03:04_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
bsdb:1/1/1_Colorectal-adenoma:conventional-adenoma-cases_vs_controls_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lacticaseibacillus|s__Lacticaseibacillus zeae
bsdb:1/2/1_Hyperplastic-Polyp:hyperplastic-polyp-cases_vs_controls_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lacticaseibacillus|s__Lacticaseibacillus zeae
bsdb:1/6/1_Colorectal-adenoma:Non-advanced-conventional-adenoma-cases_vs_controls_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lacticaseibacillus|s__Lacticaseibacillus zeae
Expand Down Expand Up @@ -2067,6 +2067,18 @@ bsdb:1049/33/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_UP NA k__Bacteria|p__Ba
bsdb:1049/34/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus equorum k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus warneri
bsdb:1049/35/1_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus equorum k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus schleiferi k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus warneri
bsdb:1049/36/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_DOWN NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus warneri
bsdb:1049/37/1_Atopic-eczema:cADPre-dogs_vs_Healthy-dogs_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus aureus k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus equorum
bsdb:1049/37/2_Atopic-eczema:cADPre-dogs_vs_Healthy-dogs_DOWN NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus pseudintermedius
bsdb:1049/38/1_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus equorum k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus warneri
bsdb:1049/39/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus hominis
bsdb:1049/40/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Mammaliicoccus|s__Mammaliicoccus sciuri
bsdb:1049/40/2_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_DOWN NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus pseudintermedius
bsdb:1049/41/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus coagulans k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus pseudintermedius k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus schleiferi
bsdb:1049/42/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus warneri
bsdb:1049/43/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_DOWN NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus pseudintermedius
bsdb:1049/44/1_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_UP NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus equorum
bsdb:1049/44/2_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_DOWN NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus epidermidis k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus hominis
bsdb:1049/45/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_DOWN NA k__Bacteria|p__Bacillota|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus hominis
bsdb:1051/1/2_Lung-cancer:Lung-cancer-(L-group)_vs_Benign-pulmonary-diseases-(N-group)_DOWN NA k__Bacteria|p__Bacillota|c__Clostridia|o__Eubacteriales|f__Oscillospiraceae|g__Ruminococcus|s__Ruminococcus gauvreauii
bsdb:1052/1/1_Alzheimer's-disease:Alzheimer’s-Disease-(AD)_vs_Cognitively-normal-control-(NC)_UP NA k__Bacteria|p__Bacillota|c__Clostridia|o__Eubacteriales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium ventriosum k__Bacteria|p__Bacillota|c__Clostridia|o__Lachnospirales|f__Lachnospiraceae|s__Lachnospiraceae bacterium NC2004
bsdb:1054/1/1_Streptococcal-infection:GBS-culture-positive-pregnant-women_vs_GBS-culture-negative-pregnant-women_DOWN NA k__Bacteria|p__Bacillota|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus iners k__Bacteria|p__Bacillota|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Limosilactobacillus|s__Limosilactobacillus coleohominis
Expand Down
14 changes: 13 additions & 1 deletion bugsigdb_signatures_species_ncbi.gmt
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
# BugSigDB 2024-10-19_02:21_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
# BugSigDB 2024-10-19_03:04_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
bsdb:1/1/1_Colorectal-adenoma:conventional-adenoma-cases_vs_controls_UP NA 57037
bsdb:1/2/1_Hyperplastic-Polyp:hyperplastic-polyp-cases_vs_controls_UP NA 57037
bsdb:1/6/1_Colorectal-adenoma:Non-advanced-conventional-adenoma-cases_vs_controls_UP NA 57037
Expand Down Expand Up @@ -2067,6 +2067,18 @@ bsdb:1049/33/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_UP NA 246432
bsdb:1049/34/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_UP NA 246432 1292
bsdb:1049/35/1_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_UP NA 246432 1295 1292
bsdb:1049/36/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_DOWN NA 1292
bsdb:1049/37/1_Atopic-eczema:cADPre-dogs_vs_Healthy-dogs_UP NA 1280 246432
bsdb:1049/37/2_Atopic-eczema:cADPre-dogs_vs_Healthy-dogs_DOWN NA 283734
bsdb:1049/38/1_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_UP NA 246432 1292
bsdb:1049/39/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_UP NA 1290
bsdb:1049/40/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_UP NA 1296
bsdb:1049/40/2_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_DOWN NA 283734
bsdb:1049/41/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_UP NA 74706 283734 1295
bsdb:1049/42/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_UP NA 1292
bsdb:1049/43/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_DOWN NA 283734
bsdb:1049/44/1_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_UP NA 246432
bsdb:1049/44/2_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_DOWN NA 1282 1290
bsdb:1049/45/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_DOWN NA 1290
bsdb:1051/1/2_Lung-cancer:Lung-cancer-(L-group)_vs_Benign-pulmonary-diseases-(N-group)_DOWN NA 438033
bsdb:1052/1/1_Alzheimer's-disease:Alzheimer’s-Disease-(AD)_vs_Cognitively-normal-control-(NC)_UP NA 39496 1410626
bsdb:1054/1/1_Streptococcal-infection:GBS-culture-positive-pregnant-women_vs_GBS-culture-negative-pregnant-women_DOWN NA 147802 181675
Expand Down
14 changes: 13 additions & 1 deletion bugsigdb_signatures_species_ncbi_exact.gmt
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
# BugSigDB 2024-10-19_02:21_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
# BugSigDB 2024-10-19_03:04_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
bsdb:1/1/1_Colorectal-adenoma:conventional-adenoma-cases_vs_controls_UP NA 57037
bsdb:1/2/1_Hyperplastic-Polyp:hyperplastic-polyp-cases_vs_controls_UP NA 57037
bsdb:1/6/1_Colorectal-adenoma:Non-advanced-conventional-adenoma-cases_vs_controls_UP NA 57037
Expand Down Expand Up @@ -2067,6 +2067,18 @@ bsdb:1049/33/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_UP NA 246432
bsdb:1049/34/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_UP NA 246432 1292
bsdb:1049/35/1_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_UP NA 246432 1295 1292
bsdb:1049/36/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_DOWN NA 1292
bsdb:1049/37/1_Atopic-eczema:cADPre-dogs_vs_Healthy-dogs_UP NA 1280 246432
bsdb:1049/37/2_Atopic-eczema:cADPre-dogs_vs_Healthy-dogs_DOWN NA 283734
bsdb:1049/38/1_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_UP NA 246432 1292
bsdb:1049/39/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_UP NA 1290
bsdb:1049/40/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_UP NA 1296
bsdb:1049/40/2_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_DOWN NA 283734
bsdb:1049/41/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_UP NA 74706 283734 1295
bsdb:1049/42/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_UP NA 1292
bsdb:1049/43/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_DOWN NA 283734
bsdb:1049/44/1_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_UP NA 246432
bsdb:1049/44/2_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_DOWN NA 1282 1290
bsdb:1049/45/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_DOWN NA 1290
bsdb:1051/1/2_Lung-cancer:Lung-cancer-(L-group)_vs_Benign-pulmonary-diseases-(N-group)_DOWN NA 438033
bsdb:1052/1/1_Alzheimer's-disease:Alzheimer’s-Disease-(AD)_vs_Cognitively-normal-control-(NC)_UP NA 39496 1410626
bsdb:1054/1/1_Streptococcal-infection:GBS-culture-positive-pregnant-women_vs_GBS-culture-negative-pregnant-women_DOWN NA 147802 181675
Expand Down
14 changes: 13 additions & 1 deletion bugsigdb_signatures_species_taxname.gmt
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
# BugSigDB 2024-10-19_02:21_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
# BugSigDB 2024-10-19_03:04_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
bsdb:1/1/1_Colorectal-adenoma:conventional-adenoma-cases_vs_controls_UP NA Lacticaseibacillus zeae
bsdb:1/2/1_Hyperplastic-Polyp:hyperplastic-polyp-cases_vs_controls_UP NA Lacticaseibacillus zeae
bsdb:1/6/1_Colorectal-adenoma:Non-advanced-conventional-adenoma-cases_vs_controls_UP NA Lacticaseibacillus zeae
Expand Down Expand Up @@ -2067,6 +2067,18 @@ bsdb:1049/33/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_UP NA Staphylococcus eq
bsdb:1049/34/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_UP NA Staphylococcus equorum Staphylococcus warneri
bsdb:1049/35/1_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_UP NA Staphylococcus equorum Staphylococcus schleiferi Staphylococcus warneri
bsdb:1049/36/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_DOWN NA Staphylococcus warneri
bsdb:1049/37/1_Atopic-eczema:cADPre-dogs_vs_Healthy-dogs_UP NA Staphylococcus aureus Staphylococcus equorum
bsdb:1049/37/2_Atopic-eczema:cADPre-dogs_vs_Healthy-dogs_DOWN NA Staphylococcus pseudintermedius
bsdb:1049/38/1_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_UP NA Staphylococcus equorum Staphylococcus warneri
bsdb:1049/39/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_UP NA Staphylococcus hominis
bsdb:1049/40/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_UP NA Mammaliicoccus sciuri
bsdb:1049/40/2_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_DOWN NA Staphylococcus pseudintermedius
bsdb:1049/41/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_UP NA Staphylococcus coagulans Staphylococcus pseudintermedius Staphylococcus schleiferi
bsdb:1049/42/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_UP NA Staphylococcus warneri
bsdb:1049/43/1_Atopic-eczema:cADpre-dogs_vs_Healthy-dogs_DOWN NA Staphylococcus pseudintermedius
bsdb:1049/44/1_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_UP NA Staphylococcus equorum
bsdb:1049/44/2_Atopic-eczema:cADtreat-dogs_vs_Healthy-dogs_DOWN NA Staphylococcus epidermidis Staphylococcus hominis
bsdb:1049/45/1_Atopic-eczema:cADpost-dogs_vs_cADpre-dogs_DOWN NA Staphylococcus hominis
bsdb:1051/1/2_Lung-cancer:Lung-cancer-(L-group)_vs_Benign-pulmonary-diseases-(N-group)_DOWN NA Ruminococcus gauvreauii
bsdb:1052/1/1_Alzheimer's-disease:Alzheimer’s-Disease-(AD)_vs_Cognitively-normal-control-(NC)_UP NA Eubacterium ventriosum Lachnospiraceae bacterium NC2004
bsdb:1054/1/1_Streptococcal-infection:GBS-culture-positive-pregnant-women_vs_GBS-culture-negative-pregnant-women_DOWN NA Lactobacillus iners Limosilactobacillus coleohominis
Expand Down
Loading

0 comments on commit 626182a

Please sign in to comment.