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hpratt
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Original file line number | Diff line number | Diff line change |
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@@ -1,6 +1,5 @@ | ||
#Thu Mar 14 15:32:43 EDT 2019 | ||
distributionBase=GRADLE_USER_HOME | ||
distributionPath=wrapper/dists | ||
distributionUrl=https\://services.gradle.org/distributions/gradle-8.1.1-bin.zip | ||
zipStoreBase=GRADLE_USER_HOME | ||
zipStorePath=wrapper/dists | ||
distributionUrl=https\://services.gradle.org/distributions/gradle-4.8-all.zip |
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Original file line number | Diff line number | Diff line change |
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@@ -0,0 +1,24 @@ | ||
package krews.config | ||
|
||
import krews.core.Capacity | ||
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data class BsubWorkflowConfig( | ||
// Interval in seconds between checks for pipeline job completion | ||
val jobCompletionPollInterval: Int = 10, | ||
// Optional ssh configuration. Will cause all slurm command to be passed through ssh. | ||
// Only available for password-less login. | ||
val ssh: SshConfig? = null | ||
) | ||
|
||
data class BsubTaskConfig( | ||
// Number of cpus. Can be used to override the runtime value. | ||
val cpus: Int? = null, | ||
// Memory capacity. Can be used to override the runtime value. | ||
val mem: Capacity? = null, | ||
// Time limit on the run time for the job in minutes. | ||
val time: Int? = null, | ||
// SBatch partition to use. | ||
val partition: String? = null, | ||
// Additional sbatch arguments | ||
val sbatchArgs: Map<String, String>? = null | ||
) |
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