Thanks for coming to check out my analytical ecosystem! This is what I consider the core of the entire system: Jupyter. With it I can bring data in from anywhere, move data out to anywhere, and do whatever analyssi or transformation needs to be done in the middle.
Getting started is easy, if you already have Docker and docker-compose installed. If you don't take care of that first:
After that it's as simple as:
- Clone this repo -
git clone https://github.com/wrathagom/analytical-ecosystem-jupyter.git - Move to the new folder -
cd analytical-ecosystem-jupyter - Docker compose up -
docker-compose up -d && docker-compose logs -f
The last command above will start up Jupyter and leave the logs showing. Once Jupyter is running it should show an output like the below:
Creating network "my-data-network" with the default driver
Creating base-jupyter-lab_jupyter_1 ... done
Attaching to base-jupyter-lab_jupyter_1
jupyter_1 | Executing the command: jupyter lab
jupyter_1 | [I 2021-06-18 14:27:37.372 ServerApp] jupyterlab | extension was successfully linked.
jupyter_1 | [W 2021-06-18 14:27:37.375 NotebookApp] 'ip' has moved from NotebookApp to ServerApp. This config will be passed to ServerApp. Be sure to update your config before our next release.
jupyter_1 | [W 2021-06-18 14:27:37.375 NotebookApp] 'port' has moved from NotebookApp to ServerApp. This config will be passed to ServerApp. Be sure to update your config before our next release.
jupyter_1 | [W 2021-06-18 14:27:37.375 NotebookApp] 'port' has moved from NotebookApp to ServerApp. This config will be passed to ServerApp. Be sure to update your config before our next release.
jupyter_1 | [I 2021-06-18 14:27:37.381 ServerApp] Writing notebook server cookie secret to /home/jovyan/.local/share/jupyter/runtime/jupyter_cookie_secret
jupyter_1 | [I 2021-06-18 14:27:37.507 ServerApp] nbclassic | extension was successfully linked.
jupyter_1 | [I 2021-06-18 14:27:37.523 LabApp] JupyterLab extension loaded from /opt/conda/lib/python3.9/site-packages/jupyterlab
jupyter_1 | [I 2021-06-18 14:27:37.523 LabApp] JupyterLab application directory is /opt/conda/share/jupyter/lab
jupyter_1 | [I 2021-06-18 14:27:37.525 ServerApp] jupyterlab | extension was successfully loaded.
jupyter_1 | [I 2021-06-18 14:27:37.528 ServerApp] nbclassic | extension was successfully loaded.
jupyter_1 | [I 2021-06-18 14:27:37.529 ServerApp] Serving notebooks from local directory: /home/jovyan
jupyter_1 | [I 2021-06-18 14:27:37.529 ServerApp] Jupyter Server 1.6.2 is running at:
jupyter_1 | [I 2021-06-18 14:27:37.529 ServerApp] http://5f9497d28719:8888/lab?token=4c1998301dfe8aae78f1ee8dfbfae55ae2bc69dba83cf6c3
jupyter_1 | [I 2021-06-18 14:27:37.529 ServerApp] http://127.0.0.1:8888/lab?token=4c1998301dfe8aae78f1ee8dfbfae55ae2bc69dba83cf6c3
jupyter_1 | [I 2021-06-18 14:27:37.529 ServerApp] Use Control-C to stop this server and shut down all kernels (twice to skip confirmation).
jupyter_1 | [C 2021-06-18 14:27:37.531 ServerApp]
jupyter_1 |
jupyter_1 | To access the server, open this file in a browser:
jupyter_1 | file:///home/jovyan/.local/share/jupyter/runtime/jpserver-7-open.html
jupyter_1 | Or copy and paste one of these URLs:
jupyter_1 | http://5f9497d28719:8888/lab?token=4c1998301dfe8aae78f1ee8dfbfae55ae2bc69dba83cf6c3
jupyter_1 | http://127.0.0.1:8888/lab?token=4c1998301dfe8aae78f1ee8dfbfae55ae2bc69dba83cf6c3
Copy the URL from the last line and paste it into your browser. Reach out if you have any problems.
This repo is still changing frequently. I am adding new libraries all the time. To update run the below commands:
git pull
docker-compose down
docker-compose build
docker-compose up -d
docker-compose logs -f
This pulls the latest repo info from Github, shuts down the notebook server, updates the image the server is using, and starts everythin back up again.