removing 0.05 from germline_detect_variants, maybe germline_filter sh…

…ould be an optional variable?
wustl-oncology · Jul 26, 2023 · db2e609 · db2e609
1 parent 82dab69
commit db2e609
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/definitions/subworkflows/germline_detect_variants.wdl b/definitions/subworkflows/germline_detect_variants.wdl
@@ -37,7 +37,7 @@ workflow germlineDetectVariants {
     Array[String]? vep_to_table_fields
     String final_tsv_prefix = "variants"
     String gnomad_field_name = "gnomADe_AF"  # only change with gnomad_filter annotation
-    Float germline_filter_gnomAD_maximum_population_allele_frequency = 0.05
+    Float germline_filter_gnomAD_maximum_population_allele_frequency
   }
 
   call f.freemix {