Allow multiple folders in class_package node registration key
#136
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: CI/CD | |
| on: | |
| push: | |
| branches: | |
| - master | |
| pull_request: | |
| branches: | |
| - master | |
| release: | |
| types: | |
| - created | |
| jobs: | |
| tests: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: | |
| - ubuntu-latest | |
| - macos-latest | |
| python: | |
| - 3.8 | |
| pypi_build: | |
| - complete | |
| - only_plotting | |
| - only_postgres | |
| - only_r | |
| - basic | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: before_install | |
| run: | | |
| echo "PYPI_BUILD=${{ matrix.pypi_build }}" >> $GITHUB_ENV | |
| echo "BOTO_CONFIG=/dev/null" >> $GITHUB_ENV | |
| echo "BUILD_OS=${{ matrix.os }}" >> $GITHUB_ENV | |
| pip install wheel | |
| - name: install_linux | |
| if: matrix.os == 'ubuntu-latest' | |
| run: | | |
| bash scripts/linux_install.sh | |
| - name: install_mac | |
| if : matrix.os == 'macos-latest' | |
| run: | | |
| bash scripts/mac_install.sh | |
| - name: install R | |
| if: matrix.pypi_build == 'complete' || matrix.pypi_build == 'only_r' | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: 4.2.0 | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| architecture: 'x64' | |
| - name: python install | |
| run: | | |
| pip install .[test] | |
| mkdir cache | |
| if [ $PYPI_BUILD = 'complete' ]; then | |
| echo "Installing postgres and plotting requirements" | |
| if [ $BUILD_OS = 'macos-latest' ]; then | |
| export LDFLAGS="-L/usr/local/opt/graphviz/lib" | |
| export CPPFLAGS="-I/usr/local/opt/graphviz/include" | |
| elif [ $BUILD_OS = 'ubuntu-latest' ]; then | |
| export LDFLAGS="-L/usr/lib/aarch64-linux-gnu" | |
| export CPPFLAGS="-I/usr/include" | |
| fi | |
| export GRAPHVIZ_DIR="$(brew --prefix graphviz)" | |
| pip install pygraphviz \ | |
| --global-option=build_ext \ | |
| --global-option="-I$GRAPHVIZ_DIR/include" \ | |
| --global-option="-L$GRAPHVIZ_DIR/lib" | |
| unset LDFLAGS | |
| unset CPPFLAGS | |
| pip install .[postgres] | |
| pip install .[R] | |
| elif [ $PYPI_BUILD = 'only_postgres' ]; then | |
| echo "Installing postgres requirements" | |
| pip install .[postgres] | |
| elif [ $PYPI_BUILD = 'only_plotting' ]; then | |
| echo "Installing plotting requirements" | |
| if [ $BUILD_OS = 'macos-latest' ]; then | |
| export LDFLAGS="-L/usr/local/opt/graphviz/lib" | |
| export CPPFLAGS="-I/usr/local/opt/graphviz/include" | |
| elif [ $BUILD_OS = 'ubuntu-latest' ]; then | |
| export LDFLAGS="-L/usr/lib/aarch64-linux-gnu" | |
| export CPPFLAGS="-I/usr/include" | |
| fi | |
| export GRAPHVIZ_DIR="$(brew --prefix graphviz)" | |
| pip install pygraphviz \ | |
| --global-option=build_ext \ | |
| --global-option="-I$GRAPHVIZ_DIR/include" \ | |
| --global-option="-L$GRAPHVIZ_DIR/lib" | |
| unset LDFLAGS | |
| unset CPPFLAGS | |
| unset LDFLAGS | |
| unset CPPFLAGS | |
| elif [ $PYPI_BUILD = 'only_r' ]; then | |
| echo "Installing R requirements" | |
| pip install .[R] | |
| fi | |
| - name: tests | |
| run: | | |
| if [ $PYPI_BUILD = 'complete' ]; then | |
| python -m pytest | |
| elif [ $PYPI_BUILD = 'only_plotting' ]; then | |
| python -m pytest -m "not postgres" | |
| elif [ $PYPI_BUILD = 'only_postgres' ]; then | |
| python -m pytest -m "not plotting" | |
| elif [ $PYPI_BUILD = 'only_r' ]; then | |
| # r skipif handled internally - only need to specify not postgres or plotting | |
| python -m pytest -m "not postgres and not plotting" | |
| else | |
| python -m pytest -m "not optional" | |
| fi | |
| build-and-publish: | |
| runs-on: ubuntu-latest | |
| needs: tests | |
| if: github.event_name == 'release' && github.event.action == 'created' | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: 3.8 | |
| architecture: 'x64' | |
| - name: Install pypa/build | |
| run: | | |
| python -m \ | |
| pip install \ | |
| build \ | |
| sphinx \ | |
| myst_parser \ | |
| sphinx-rtd-theme \ | |
| --user | |
| - name: Build a binary wheel and a source tarball | |
| run: >- | |
| python -m | |
| build | |
| --sdist | |
| --wheel | |
| --outdir dist/ | |
| . | |
| - name: publish to pypi | |
| if: startsWith(github.ref, 'refs/tags') | |
| uses: pypa/gh-action-pypi-publish@release/v1 | |
| with: | |
| password: ${{ secrets.PYPI_API_TOKEN }} | |
| - name: build docs | |
| run: bash scripts/generate_docs.sh || exit 1 | |
| - name: publish github pages | |
| uses: peaceiris/actions-gh-pages@v3 | |
| with: | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| publish_dir: ./docs |