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@yfyang86 yfyang86 released this 23 Nov 10:06
· 19 commits to v0.0.1 since this release
0.0.1
7a8a446

Release Note

version 0.0.1
Date 2022-11-22
Maintainer Yifan Yang [email protected]
Author Xiaoqin Pan, Yifan Yang

PMAT detects the differentially methylated regions. It solves the twin-pair problem using tools such as metilene.

  • PMAT detects the differentially methylated regions.
  • PMAT has the same ability as metilene.
  • PMAT has the same option as metilene.
  • PMAT provides an automatic optimization and an initial value-choosing strategy to perform MLE calculation.

Binary:

  1. source code: v-0.0.1-src
  2. Linux X64: v-0.0.1-linux64-gcc7
  3. Mac OSX ARM: v-0.0.1-OSX-M1
  4. OSX X86: v-0.0.1-OSX-Intel
  5. Windows: v-0.0.1-Window-X64

Note: for Windows user, one should install: Rtools42 and run C:\rtools42\ucrt64.exe, and in the bash, run

# to where you download pmat
cd pmat
cd ./release/Win64
tar vxf metilene-0.1-win64-rtools42.tar.gz
./metilene --help
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