close #2368: wrap code chunk in try() for purl() when the chunk optio… #969
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| on: | |
| push: | |
| branches: | |
| - main | |
| - master | |
| pull_request: | |
| branches: | |
| - main | |
| - master | |
| workflow_dispatch: | |
| inputs: | |
| extra-packages: | |
| description: 'extra package to install for the runs (like a dev version of one of the deps) - comma separated' | |
| required: false | |
| type: string | |
| name: Check knitr examples | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.run_id }} | |
| cancel-in-progress: true | |
| jobs: | |
| run-examples: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }})${{ github.event.inputs.extra-packages && ' - with some extra packages'|| ''}} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: ubuntu-latest, r: 'release'} | |
| env: | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| DISPLAY: ':99.0' | |
| RGL_USE_NULL: TRUE | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| use-public-rspm: true | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - uses: r-lib/actions/setup-tinytex@v2-branch | |
| env: | |
| # install full prebuilt version | |
| TINYTEX_INSTALLER: TinyTeX | |
| - name: Is this workflow running with extra package | |
| if: github.event.inputs.extra-packages | |
| run: | | |
| echo "::notice::Running with the following extra packages for pak: ${{ github.event.inputs.extra-packages }}" | |
| shell: bash | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| packages: deps::. | |
| extra-packages: > | |
| XML, | |
| ${{ github.event.inputs.extra-packages }} | |
| - name: Retrieve knitr-examples | |
| # On PR, it will checkout same branch if it exists there | |
| uses: ./.github/actions/checkout-knitr-examples | |
| - name: Install knitr-example dev | |
| run: install.packages(readLines("knitr-examples/R-packages")) | |
| shell: Rscript {0} | |
| - name: Install system dependencies | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt-get install -y libpoppler-cpp-dev graphviz asymptote highlight coffeescript scala optipng ghostscript | |
| - name: Install CTAN dependencies | |
| run: | | |
| tinytex::tlmgr_install("dvisvgm") | |
| shell: Rscript {0} | |
| - name: Check knitr-examples | |
| run: | | |
| rm knitr-examples/cache -rf | |
| make integration | |
| shell: bash | |
| - uses: actions/upload-artifact@v4 | |
| if: failure() | |
| with: | |
| name: knitr-examples | |
| path: | |
| knitr-examples/[0-9][0-9][0-9]-*.* | |
| retention-days: 7 |