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todo

todo #201

Workflow file for this run

name: Haplomap
# events but only for the master branch
on:
push:
branches:
- master
pull_request:
branches:
- master
# A workflow run is made up of one or more jobs that can run sequentially or in parallel
jobs:
# This workflow contains a single job called "build"
build:
# The type of runner that the job will run on
runs-on: ubuntu-latest
# Steps represent a sequence of tasks that will be executed as part of the job
steps:
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
- uses: actions/checkout@v2
# Runs a single command using the runners shell
- name: Install gcc, cmake
run: |
sudo apt-get install -qq cmake
sudo apt-get install make
sudo apt-get install libgsl-dev
# Runs a set of commands using the runners shell
# - name: Install GSL
# # run: sudo apt-get install libgsl-dev
# run: |
# cd ${GITHUB_WORKSPACE}
# wget http://ftp.wayne.edu/gnu/gsl/gsl-2.6.tar.gz
# tar -xvzf gsl-2.6.tar.gz
# cd gsl-2.6
# sudo ./configure --prefix=${GITHUB_WORKSPACE}/gsl
# sudo make
# sudo make install
# export LD_LIBRARY_PATH=${GITHUB_WORKSPACE}/gsl/lib:$LD_LIBRARY_PATH
- name: CMake build
run: |
cd ${GITHUB_WORKSPACE}
mkdir -p build && cd build
cmake ..
make
- name: Test cmmand
run: |
cd ${GITHUB_WORKSPACE}
./build/bin/haplomap --help