exome=True with correction=True fix

AlexandrovLab · Nov 28, 2023 · 24f3db5 · 24f3db5
1 parent c652546
commit 24f3db5
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Showing 3 changed files with 7 additions and 4 deletions.
diff --git a/SigProfilerClusters/hotspot.py b/SigProfilerClusters/hotspot.py
@@ -668,7 +668,10 @@ def calculateSampleIMDs (project, folders, directory, directory_orig, vcf_path_c
 		sim_count = len(files)
 		for file in files:
 			if correction:
-				sim = file.split("_")[-3]
+				if "_exome_" in file:
+					sim = file.split("_")[-4]
+				else:
+					sim = file.split("_")[-3]				
 				densityMutsSim[sim] = []
 			chroms = []
 			if file == '.DS_Store':

diff --git a/SigProfilerClusters/version.py b/SigProfilerClusters/version.py
@@ -1,6 +1,6 @@
 
 # THIS FILE IS GENERATED FROM SIGPROFILECLUSTERS SETUP.PY
-short_version = '1.1.0'
-version = '1.1.0'
+short_version = '1.1.1'
+version = '1.1.1'
 
 
diff --git a/setup.py b/setup.py
@@ -15,7 +15,7 @@ def readme():
 	# with open('README.rst') as f:
 	# 	return(f.read())
 
-VERSION = '1.1.1'
+VERSION = '1.1.2'
 
 def write_version_py(filename='SigProfilerClusters/version.py'):
 	# Copied from numpy setup.py