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Clancy-wu/LesionBrainMapping

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.ipynb_checkpoints
.ipynb_checkpoints
 
 
brainmapping
brainmapping
 
 
10_overlap_maps.py
10_overlap_maps.py
 
 
11_palm_analysis_step1.py
11_palm_analysis_step1.py
 
 
11_palm_analysis_step2.py
11_palm_analysis_step2.py
 
 
12_palm_analysis_with_covariates.py
12_palm_analysis_with_covariates.py
 
 
13_palm_two-sample_analysis_with_eb_and_cov.py
13_palm_two-sample_analysis_with_eb_and_cov.py
 
 
14_preprocessing.py
14_preprocessing.py
 
 
15_preprocessing_existing_folder.py
15_preprocessing_existing_folder.py
 
 
16_preprocessing_structural_connectivity.py
16_preprocessing_structural_connectivity.py
 
 
17_preprocessing_structural_connectivity_exsiting_folder.py
17_preprocessing_structural_connectivity_exsiting_folder.py
 
 
18_results_ppt_creator.py
18_results_ppt_creator.py
 
 
19_roi_barbershop.py
19_roi_barbershop.py
 
 
1_mask_priori_ROI.py
1_mask_priori_ROI.py
 
 
20_roi_binary_predictor_testing.py
20_roi_binary_predictor_testing.py
 
 
21_roi_overlap.py
21_roi_overlap.py
 
 
22_spatial_correlation.py
22_spatial_correlation.py
 
 
23_spatial_varing_covariates.py
23_spatial_varing_covariates.py
 
 
24_sphere_maker.py
24_sphere_maker.py
 
 
25_test_nimlab_kernel.py
25_test_nimlab_kernel.py
 
 
26_two_sample_ttest.py
26_two_sample_ttest.py
 
 
27_xnat_grabber.py
27_xnat_grabber.py
 
 
28_xnat_upload_notebook.py
28_xnat_upload_notebook.py
 
 
2_check_empty.py
2_check_empty.py
 
 
3_coordinate_explore.py
3_coordinate_explore.py
 
 
4_generate_connectome.py
4_generate_connectome.py
 
 
5_ind_seed_to_voxel_batch.py
5_ind_seed_to_voxel_batch.py
 
 
6_logistic_regression_and_roc_curve_analysis.py
6_logistic_regression_and_roc_curve_analysis.py
 
 
7_multiple_group_inspector.py
7_multiple_group_inspector.py
 
 
8_network_damage_calculator.py
8_network_damage_calculator.py
 
 
9_one_sample_t_test.py
9_one_sample_t_test.py
 
 
LNM_mechanism.png
LNM_mechanism.png
 
 
LNM_script.py
LNM_script.py
 
 
README.md
README.md
 
 
mni_coordinate.csv
mni_coordinate.csv
 
 
test_kangwu.ipynb
test_kangwu.ipynb
 
 

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This is the script of how to make lesion brain mapping.

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