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New microservices image with working RunServices #81

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wants to merge 146 commits into from
Closed

New microservices image with working RunServices #81

wants to merge 146 commits into from

Commits on Nov 10, 2023

  1. Database creation for daq-kube Microservices image

    @TiagoTAlves
    TiagoTAlves committed Nov 10, 2023
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  2. added db queries framework but commented out for now

    @TiagoTAlves
    TiagoTAlves committed Nov 10, 2023
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Commits on Nov 15, 2023

  1. corrected return out of function

    @TiagoTAlves
    TiagoTAlves committed Nov 15, 2023
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  2. making some changes to dockerfile so image can build, will change bac… 

    …k afterwards
    @TiagoTAlves
    TiagoTAlves committed Nov 15, 2023
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  3. change from ssh back to https

    @TiagoTAlves
    TiagoTAlves committed Nov 15, 2023
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  4. continued changes to runserv microservices image

    @TiagoTAlves
    TiagoTAlves committed Nov 15, 2023
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  5. getting errors with oracle backend, testing with just postgres for now

    @TiagoTAlves
    TiagoTAlves committed Nov 15, 2023
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Commits on Nov 16, 2023

  1. removing oracle mentions

    @TiagoTAlves
    TiagoTAlves committed Nov 16, 2023
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  2. added sqlalchemy to requirements

    @TiagoTAlves
    TiagoTAlves committed Nov 16, 2023
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  3. added a backend fpr runnumber-rest

    @TiagoTAlves
    TiagoTAlves committed Nov 16, 2023
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  4. typo fixes

    @TiagoTAlves
    TiagoTAlves committed Nov 16, 2023
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  5. changes to rest.py and credentials.py

    @TiagoTAlves
    TiagoTAlves committed Nov 16, 2023
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  6. added sqlalchemy_utils as another required package

    @TiagoTAlves
    TiagoTAlves committed Nov 16, 2023
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Commits on Nov 20, 2023

  1. changing the postgresql port

    @TiagoTAlves
    TiagoTAlves committed Nov 20, 2023
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  2. indentation error

    @TiagoTAlves
    TiagoTAlves committed Nov 20, 2023
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  3. fixing microservices image

    @TiagoTAlves
    TiagoTAlves committed Nov 20, 2023
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  4. added MetaData to import list

    @TiagoTAlves
    TiagoTAlves committed Nov 20, 2023
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Commits on Nov 21, 2023

  1. more connection tests

    @TiagoTAlves
    TiagoTAlves committed Nov 21, 2023
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  2. more testing

    @TiagoTAlves
    TiagoTAlves committed Nov 21, 2023
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  3. add as a service

    @TiagoTAlves
    TiagoTAlves committed Nov 21, 2023
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  4. try a different service

    @TiagoTAlves
    TiagoTAlves committed Nov 21, 2023
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  5. remove engine from inside metadata

    @TiagoTAlves
    TiagoTAlves committed Nov 21, 2023
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  6. timezone errors

    @TiagoTAlves
    TiagoTAlves committed Nov 21, 2023
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  7. more timezone errors

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    TiagoTAlves committed Nov 21, 2023
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Commits on Nov 22, 2023

  1. psycopg2 added to engine

    @TiagoTAlves
    TiagoTAlves committed Nov 22, 2023
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  2. couldn't resolve host

    @TiagoTAlves
    TiagoTAlves committed Nov 22, 2023
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  3. debugging

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    TiagoTAlves committed Nov 22, 2023
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Commits on Nov 28, 2023

  1. Attempt a code cleanup org for runnumber

    @jcpunk
    jcpunk committed Nov 28, 2023
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  2. Try to facter out into parts

    @jcpunk
    jcpunk committed Nov 28, 2023
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Commits on Dec 4, 2023

  1. cleaned up runregistry in the same way as runnumber

    @TiagoTAlves
    TiagoTAlves committed Dec 4, 2023
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  2. changed scalar_one() to scalar() and removed credentials.py

    @TiagoTAlves
    TiagoTAlves committed Dec 4, 2023
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  3. chanegd run_number to rn so that it is more inline with RunNumber table

    @TiagoTAlves
    TiagoTAlves committed Dec 4, 2023
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  4. adding Column to import

    @TiagoTAlves
    TiagoTAlves committed Dec 4, 2023
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  5. made changes to requirements so all modules are compatible when creat… 

    …ing dependency image
    @TiagoTAlves
    TiagoTAlves committed Dec 4, 2023
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  6. still unfinished chanegs to runregistry/api

    @TiagoTAlves
    TiagoTAlves committed Dec 4, 2023
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  7. Column is still complaining so I added the sqlalchemy module too

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    TiagoTAlves committed Dec 4, 2023
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Commits on Dec 5, 2023

  1. solving database errors

    @TiagoTAlves
    TiagoTAlves committed Dec 5, 2023
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  2. replaced sqlalchemy with flask_sqlalchemy modules

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    TiagoTAlves committed Dec 5, 2023
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  3. changed sqlite to postgresql

    @TiagoTAlves
    TiagoTAlves committed Dec 5, 2023
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  4. continued image problem solving

    @TiagoTAlves
    TiagoTAlves committed Dec 5, 2023
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  5. taking it back to what it was before

    @TiagoTAlves
    TiagoTAlves committed Dec 5, 2023
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  6. Try to register db object with application

    @jcpunk
    jcpunk committed Dec 5, 2023
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  7. Fix path error

    @jcpunk
    jcpunk committed Dec 5, 2023
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  8. reorganised db sqlalchemy

    @TiagoTAlves
    TiagoTAlves committed Dec 5, 2023
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  9. fix path error for runregistry

    @TiagoTAlves
    TiagoTAlves committed Dec 5, 2023
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  10. added SQLAlchemy as app

    @TiagoTAlves
    TiagoTAlves committed Dec 5, 2023
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  11. changing path to database

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    TiagoTAlves committed Dec 5, 2023
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  12. changing connection string and fixed circular db

    @TiagoTAlves
    TiagoTAlves committed Dec 5, 2023
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  13. change entrypoint for runregistry

    @TiagoTAlves
    TiagoTAlves committed Dec 5, 2023
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  14. Drop Oracle LD libpath

    @jcpunk
    jcpunk committed Dec 5, 2023
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  15. Drop obsolete comment

    @jcpunk
    jcpunk committed Dec 5, 2023
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  16. Drop old interface files

    @jcpunk
    jcpunk committed Dec 5, 2023
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  17. Drop old comments

    @jcpunk
    jcpunk committed Dec 5, 2023
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  18. Minor nits in entrypoint.sh

    @jcpunk
    jcpunk committed Dec 5, 2023
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  19. Don't enclose, just run unconditionally

    @jcpunk
    jcpunk committed Dec 5, 2023
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  20. Reset name back to test mode

    @jcpunk
    jcpunk committed Dec 5, 2023
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  21. Fix duplicate declare

    @jcpunk
    jcpunk committed Dec 5, 2023
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Commits on Dec 6, 2023

  1. changed deployments to match ones in daq-kube

    @TiagoTAlves
    TiagoTAlves committed Dec 6, 2023
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  2. Minify and restore image spec

    @jcpunk
    jcpunk committed Dec 6, 2023
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  3. Note required bits

    @jcpunk
    jcpunk committed Dec 6, 2023
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Commits on Dec 7, 2023

  1. added run number as a foreign key connected to RunNumber table

    @TiagoTAlves
    TiagoTAlves committed Dec 7, 2023
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Commits on Dec 8, 2023

  1. added a row for the inital run so that all subsequent runs can platfo… 

    …rm off of this one
    @TiagoTAlves
    TiagoTAlves committed Dec 8, 2023
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  2. changed some queries so its more similar to runnumber queries#

    @TiagoTAlves
    TiagoTAlves committed Dec 8, 2023
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  3. bringing dockerfile back to original in prep for PR

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    TiagoTAlves committed Dec 8, 2023
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  4. Try to cleanup queries

    @jcpunk
    jcpunk committed Dec 8, 2023
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Commits on Dec 12, 2023

  1. Merge remote-tracking branch 'origin' into riehecky/runnumber_reorg

    @TiagoTAlves
    TiagoTAlves committed Dec 12, 2023
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Commits on Dec 13, 2023

  1. revert to working point

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    TiagoTAlves committed Dec 13, 2023
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  2. if no data, add a value starting at run 1

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    TiagoTAlves committed Dec 13, 2023
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  3. circular arguments makeing image not work

    @TiagoTAlves
    TiagoTAlves committed Dec 13, 2023
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  4. foreign key problem

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    TiagoTAlves committed Dec 13, 2023
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Commits on Dec 14, 2023

  1. changes in response to PR comments

    @TiagoTAlves
    TiagoTAlves committed Dec 14, 2023
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  2. better comments for api query in run number

    @TiagoTAlves
    TiagoTAlves committed Dec 14, 2023
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  3. final comments and commits changing the curl commands and adding more… 

    … detail to comments
    @TiagoTAlves
    TiagoTAlves committed Dec 14, 2023
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  4. set initial runnumber as environment variable

    @TiagoTAlves
    TiagoTAlves committed Dec 14, 2023
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  5. black format

    @jcpunk
    jcpunk committed Dec 14, 2023
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  6. added missing curl, env variable description and changed scalar_one t… 

    …o scalar
    @TiagoTAlves
    TiagoTAlves committed Dec 14, 2023
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  7. Simplify imports

    @jcpunk
    jcpunk committed Dec 14, 2023
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  8. added RUN_START to the right place

    @TiagoTAlves
    TiagoTAlves committed Dec 14, 2023
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  9. added a foreignkey between RunReg tables

    @TiagoTAlves
    TiagoTAlves committed Dec 14, 2023
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  10. asthetic changes

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    TiagoTAlves committed Dec 14, 2023
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Commits on Jan 29, 2024

  1. testing for self-doc

    @TiagoTAlves
    TiagoTAlves committed Jan 29, 2024
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  2. database changes

    @TiagoTAlves
    TiagoTAlves committed Jan 29, 2024
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  3. changes to api and rest to make it work

    @TiagoTAlves
    TiagoTAlves committed Jan 29, 2024
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  4. asthetic changes

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    TiagoTAlves committed Jan 29, 2024
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  5. removed irrelevant stuff from merging

    @TiagoTAlves
    TiagoTAlves committed Jan 29, 2024
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  6. more aesthetic changes

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    TiagoTAlves committed Jan 29, 2024
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Commits on Feb 1, 2024

  1. bad changes made reverted

    @TiagoTAlves
    TiagoTAlves committed Feb 1, 2024
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Commits on Feb 2, 2024

  1. merging with develop

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    TiagoTAlves committed Feb 2, 2024
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  2. Merge failed, fixing it

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    TiagoTAlves committed Feb 2, 2024
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Commits on Feb 5, 2024

  1. Merge branch 'develop' into riehecky/runnumber_reorg

    @TiagoTAlves
    TiagoTAlves authored Feb 5, 2024
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Commits on Feb 13, 2024

  1. added two env_variables, one to establish what database (Oracle or Po… 

    …stgres) and what deployment pod (prod or dev) that the microservices gets deployed to
    @TiagoTAlves
    TiagoTAlves committed Feb 13, 2024
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  2. added more env_variable conditions for oracle/postgresql and dev/prod

    @TiagoTAlves
    TiagoTAlves committed Feb 13, 2024
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  3. Merge branch 'develop' into riehecky/runnumber_reorg

    @TiagoTAlves
    TiagoTAlves committed Feb 13, 2024
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  4. made some changes to api's that I had forgotten to change when conver… 

    …ting to sqlalchemy
    @TiagoTAlves
    TiagoTAlves committed Feb 13, 2024
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  5. small corrections to previous commits

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    TiagoTAlves committed Feb 13, 2024
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  6. small changes for oracle test

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    TiagoTAlves committed Feb 13, 2024
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  7. changes in a hurry for oracle testing

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    TiagoTAlves committed Feb 13, 2024
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Commits on Feb 14, 2024

  1. cleanup leaks from daq-kube

    @jcpunk
    jcpunk committed Feb 14, 2024
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  2. python black/isort

    @jcpunk
    jcpunk committed Feb 14, 2024
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  3. database type is derrived from database uri

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    jcpunk committed Feb 14, 2024
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Commits on Feb 16, 2024

  1. Switch to open source oracle client 

    fewer features, but easy to redistribute/build off site
    @jcpunk
    jcpunk committed Feb 16, 2024
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Commits on Feb 26, 2024

  1. oracles doesn't like quotation marks so changed to inverted commas

    @TiagoTAlves
    TiagoTAlves committed Feb 26, 2024
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  2. aesthetic changes to database.py in both runservices

    @TiagoTAlves
    TiagoTAlves committed Feb 26, 2024
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  3. Fix exception catch

    @jcpunk
    jcpunk committed Feb 26, 2024
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  4. Switch to fstrings

    @jcpunk
    jcpunk committed Feb 26, 2024
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  5. rn isn't used in run registry so changed it to run_number

    @TiagoTAlves
    TiagoTAlves committed Feb 26, 2024
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Commits on Feb 28, 2024

  1. changes to runregistry and runnumber to fix api queries

    @TiagoTAlves
    TiagoTAlves committed Feb 28, 2024
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  2. further changes to get runregistry working

    @TiagoTAlves
    TiagoTAlves committed Feb 28, 2024
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  3. foreign key and formatting

    @TiagoTAlves
    TiagoTAlves committed Feb 28, 2024
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  4. Ignore accidentially compiled python objects

    @jcpunk
    jcpunk committed Feb 28, 2024
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  5. changes to where function

    @TiagoTAlves
    TiagoTAlves committed Feb 28, 2024
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  6. making previous queries from oracle output the same as with new image

    @TiagoTAlves
    TiagoTAlves committed Feb 28, 2024
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  7. Try and unify/simplify service/sqlalchemy

    @jcpunk
    jcpunk committed Feb 28, 2024
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  8. Also include path

    @jcpunk
    jcpunk committed Feb 28, 2024
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  9. Add indexes and maybe compat url paths?

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Commits on Feb 29, 2024

  1. Setup compat paths for old and new api

    @jcpunk
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  2. Run through black

    @jcpunk
    jcpunk committed Feb 29, 2024
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  3. Fix typo assignment

    @jcpunk
    jcpunk committed Feb 29, 2024
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  4. Run isort

    @jcpunk
    jcpunk committed Feb 29, 2024
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  5. Minor spaces

    @jcpunk
    jcpunk committed Feb 29, 2024
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  6. Asked Chat GPT to simplify the codebase

    @jcpunk
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  7. Need to import after db is init

    @jcpunk
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  8. Simplify a bit more

    @jcpunk
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  9. Since we're using the default names, just let the names default

    @jcpunk
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  10. Try to make database start at the right run number

    @jcpunk
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  11. Fix typo in debug messages

    @jcpunk
    jcpunk committed Feb 29, 2024
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  12. template out the help page. Not sure if this is cleaner or not...

    @jcpunk
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  13. Not nested enough

    @jcpunk
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  14. Update doc

    @jcpunk
    jcpunk committed Feb 29, 2024
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  15. Use positive logic

    @jcpunk
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  16. Drop default lines

    @jcpunk
    jcpunk committed Feb 29, 2024
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  17. Oracle thick client not required

    @jcpunk
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Commits on Mar 1, 2024

  1. make response belongs to flask

    @TiagoTAlves
    TiagoTAlves committed Mar 1, 2024
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Commits on Mar 4, 2024

  1. Revert "template out the help page. Not sure if this is cleaner or no… 

    …t..."

This reverts commit ded3fc2.
    @jcpunk
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  2. changed names of directories (so can be called for importing) and del… 

    …eted database and authentication from runnumber_rest and called the same python files from runregistry_rest
    @TiagoTAlves
    TiagoTAlves committed Mar 4, 2024
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  3. changed runnumber api to macth runregistry api

    @TiagoTAlves
    TiagoTAlves committed Mar 4, 2024
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  4. changed the comments and returns to match oracle

    @TiagoTAlves
    TiagoTAlves committed Mar 4, 2024
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  5. some returns had to many nested []

    @TiagoTAlves
    TiagoTAlves committed Mar 4, 2024
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  6. Merge pull request #90 from DUNE-DAQ/titavare/runservices_reorg 

    Making some changes on a different branch, just in case you're unhappy with them and want to do them in a different way
    @TiagoTAlves
    TiagoTAlves authored Mar 4, 2024
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  7. changed all modules so they're all calling from microservices as the … 

    …python path
    @TiagoTAlves
    TiagoTAlves committed Mar 4, 2024
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  8. added pythonpath to dockerfile for module finding

    @TiagoTAlves
    TiagoTAlves committed Mar 4, 2024
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  9. changing app route / in api

    @TiagoTAlves
    TiagoTAlves committed Mar 4, 2024
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  10. Try to make the runregistry application fully replace runnumber. 

    It should now be able to listen on both ports and evaluate queries
within a sql transaction set for better atomic bits.
    @jcpunk
    jcpunk committed Mar 4, 2024
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Commits on Mar 8, 2024

  1. Fix path

    @jcpunk
    jcpunk committed Mar 8, 2024
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  2. Drop default lines

    @jcpunk
    jcpunk committed Mar 8, 2024
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Commits on Mar 10, 2024

  1. combining some changes made in other PR to make it work in both postg… 

    …resql and oracle
    @TiagoTAlves
    TiagoTAlves committed Mar 10, 2024
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