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49 Open 43 Closed
49 Open 43 Closed
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Issues list

cellScan error
#96 opened Dec 16, 2024 by tkcaccia
5
germline module merge multiple samples
#95 opened Dec 14, 2024 by tkcaccia
Smart-seq2?
#94 opened Dec 13, 2024 by itslittman
2
Germline analysis
#91 opened Dec 12, 2024 by tkcaccia
1
1000 genome filter
#90 opened Dec 10, 2024 by tkcaccia
1
Error in line 96
#89 opened Dec 9, 2024 by itslittman
1
How to set up the preprocessing part of the chromosome
#86 opened Nov 7, 2024 by qiqi277
4
Error while loading shared libraries: libncurses.so.5 not found
#85 opened Oct 30, 2024 by ttt-404
1
"NA" in putativeSNV.csv$LDrefine_trioLoci_score and LDrefine_merged_score
#84 opened Oct 19, 2024 by Arsenalwins
1
How to run Monopogen gremlin on R2 of 10x fastq
#82 opened Oct 14, 2024 by amirshams84
1
java.lang.OutOfMemoryError when running beagle
#79 opened Oct 8, 2024 by wkdeng
1
Questions about genotype phasing for each SNV in each cell
#75 opened Sep 10, 2024 by Li-Chengyu
2
handling chromosome X
#73 opened Aug 19, 2024 by xiaolinzhu
2
Monopogen treats multiple samples as single sample in germline SNV calling
#72 opened Aug 14, 2024 by yu-tong-wang
3
Number of Called Variants
#70 opened Jul 30, 2024 by keertikoya
1
Incorrect version of beagle when using conda install monopogen
#69 opened Jul 11, 2024 by hima-anbunathan-takara
5
Running monopogen on very large samples
#68 opened Jul 11, 2024 by aidanshoham12
Can i run Monopogen for non-tumor sample?
#67 opened Jul 8, 2024 by ZehangJiang
1
germ line module not detecting full chromosome
#65 opened Jun 23, 2024 by aidanshoham12
3
Somatic Module on multiple chromosomes
#64 opened May 31, 2024 by Arsamat
1
openCRAVAT application
#63 opened May 24, 2024 by ariannadib
2
bam.lst file format
#62 opened May 23, 2024 by aidanshoham12
1
Error during LDrefinement
#61 opened May 21, 2024 by Thapeachydude
@ZiyiWang7
10
Different somatic calls across Monopogen v.1.0 and v1.6.0 help wanted Extra attention is needed
#58 opened May 9, 2024 by ypershad
5
Missing chr20.germline.vcf from germline calling step
#55 opened May 7, 2024 by briansha
8
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