Code

Support Blueprint mesh in shaping#1455

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gunney1 wants to merge 103 commits intodevelopLLNL/axom:developfrom feature/gunney/blueprint-mesh-shapingLLNL/axom:feature/gunney/blueprint-mesh-shapingCopy head branch name to clipboard

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Commits

Commits on Oct 3, 2024

• Transitioning to support blueprint mesh in conduit::Node.

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• Remove obsolete GridFunctionView utility class.

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• Add missing IntersectionShaper for using blueprint mesh in conduit::Node.

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• Support shaping even without MFEM.

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• Avoid using removed util function getUmpireDeviceId.

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• Make private function populateHexesFromMesh public because NVCC complained.

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• Revert to GridFunctionView because of bugs in TempArrayAccess utility.

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Commits on Oct 7, 2024

• Merge remote-tracking branch 'dvl/feature/gunney/construct-shapes-in-memory' into feature/gunney/blueprint-mesh-shaping

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• Simplify include guards in shaping code.

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Commits on Oct 9, 2024

• Minor comment and white-space change.

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Commits on Oct 14, 2024

• Remove support for reading in MFEM mesh in the new test.

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• Remove unused code (for sampling shaping) in the new test.

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Commits on Oct 15, 2024

• Autoformat.

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• Add ability to generate cartesian mesh as an unstructured hex mesh.

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Commits on Oct 16, 2024

• Progress toward using blueprint mesh.

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• Remove code for MFEM mesh that's been replaced by more general code.

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• Further progress toward using Blueprint mesh in test.

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Commits on Oct 17, 2024

• Debug new code supporting blueprint mesh.

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• Remove overly restrictive requirements for Mesh object.

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• Debug scalar field generation with blueprint mesh (add missing blueprint nodes).

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• Autoformat.

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• Allow reshaping sidre::View holding array data.

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• More progress toward Blueprint support in IntersectionShaper.

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Commits on Oct 18, 2024

• More progress toward testing Blueprint support.

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• Slight refactor for readability.

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• Add missing matsets data to blueprint mesh.

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• Debug test code. First largely working version.

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Commits on Oct 20, 2024

• Fix bug in new structured box mesh generator utility.

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Commits on Oct 21, 2024

• Fix non-MFEM builds and add switch to toggle MFEM mesh.

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• Remove debug code.

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• Autoformat.

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Commits on Oct 22, 2024

• Fix bugs in handling meshType intput.

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  6c6b7db

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• Fix error in guards against using MFEM when it's not there.

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• Fix scope of MFEM variable.

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• Fix error setting up tet geometry.

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• Tweak shapes to center them and reduce resolution-related bumps.

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• Test non-grid-aligned VOR directin.

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• Fix a weird numerical error, maybe caused by large floating point values.

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Commits on Oct 23, 2024

• Tilt the plane shape away from the axes.

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• Don't test MFEM mesh if no MFEM.

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• Autoformat.

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Commits on Oct 24, 2024

• Debug device runtime policies in shaper and test code.

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Commits on Oct 26, 2024

• Add conduit::Node mesh support, not tested yet.

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Commits on Oct 27, 2024

• Add utilities to check memory spaces against execution spaces.

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• Importing Conduit array into View should use the parent Group's memory space.

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• Fix mesh_helper inconsistencies in mixing host and device data.

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Commits on Oct 28, 2024

• Fix IntersectionShaper to work in a single memory space.

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• Fix bug in populating vertices array with cuda + mfem.

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• Autoformat.

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• Silence warnings.

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• Silence more warnings.

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• Mods and guards for building without RAJA or Umpire.

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• Autoformat.

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Commits on Oct 29, 2024

• Add guards for non-sidre builds.

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Commits on Nov 7, 2024

• Merge remote-tracking branch 'gh/feature/gunney/construct-shapes-in-memory' into feature/gunney/blueprint-mesh-shaping

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Commits on Nov 8, 2024

• Silence compiler warnings: unused variables and shadow declarations.

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Commits on Nov 14, 2024

• Support external BP mesh as a Conduit Node.

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Commits on Nov 15, 2024

• Don't create vol frac data unless/until it's needed in applyReplacementRules.

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• More informative handling of missing fields in conduit mesh.

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• Allow access to individual shape results for apps that have their own replacement step.

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• Add notes for future code clean-up.

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Commits on Nov 21, 2024

• Set the directory path from the ShapeSet when constructing Shaper.

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• Remove ShapeSet's obsolete path resolution code.

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• Remove resolvePath in favor of using the file utilities.

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• Add utility to return the parent path from a filesystem path.

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Commits on Nov 22, 2024

• Fix missing and unneeded #includes.

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Commits on Nov 23, 2024

• Replace kernel to set array values with calls to fill.

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• Add logic to avoid unnecessarily recomputing some arrays when

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Commits on Nov 26, 2024

• Merge remote-tracking branch 'dvl/feature/gunney/construct-shapes-in-memory' into feature/gunney/blueprint-mesh-shaping

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• Fix bug accessing existing field in blueprint mesh.

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• Autoformat and remove unused code.

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Commits on Dec 6, 2024

• Add timers and make other changes.

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  f8c7d7d

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Commits on Dec 12, 2024

• Fix new code that work on Conduit mesh. This broke the MFEM tests.

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• remove obsolete code.

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Commits on Dec 13, 2024

• Don't test MFEM mesh if not configured with MFEM.

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• Guess allocator directly from external data's pointer.

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Commits on Dec 14, 2024

• Fix bug that put some blueprint mesh data in the wrong memspace.

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• Remove vestige of 2D support that was copied from another example.

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Commits on Jan 3, 2025

• Convert structured to unstructured Blueprint mesh in Axom.

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• Merge remote-tracking branch 'gh/feature/gunney/construct-shapes-in-memory' into feature/gunney/blueprint-mesh-shaping

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Commits on Jan 4, 2025

• Fix non-C2C build.

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• Fix non-Conduit build.

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Commits on Jan 6, 2025

• Always use axom::IndexType for Blueprint connectivity data.

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• Autoformat.

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Commits on Jan 7, 2025

• Timer for Shaper::loadShapeInternal.

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Commits on Jan 8, 2025

• Remove a check that unintentionally requires user data to be Umpire-allocated.

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• Fix breakage that occurs when user data isn't Umpire-allocated.

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Commits on Jan 14, 2025

• Merge remote-tracking branch 'gh/develop' into feature/gunney/blueprint-mesh-shaping

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Commits on Jan 15, 2025

• Autoformat.

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• Less confusing variable name.

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• Merge remote-tracking branch 'gh/develop' into feature/gunney/blueprint-mesh-shaping

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Commits on Jan 16, 2025

• Silence warning about unreachable instruction.

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• Fix crash in usesAllocId when the id is not from Umpire.

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• Add missing methods in ASYNC versions of device execution spaces.

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• Update RELEASE-NOTES for interface changes.

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• Changes to comments.

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• Update IntersectionShaper dox comments.

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• Autoformat.

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Commits on Jan 17, 2025

• Change "volume of revolution" to "surface of revolution."

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• Dox comment changes and remove an unused method.

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• Avoid unneccesarily re-allocating memory.

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Commits on Jan 18, 2025

• Add convenience method to get default allocator id for a runtime execution policy.

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• Let user specify allocator ID for shapers.

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