Merge pull request #7 from LUMC/develop

update with docker
LUMC · May 1, 2020 · a13dd2c · a13dd2c
2 parents 4f2aa95 + 79f0eec
commit a13dd2c
Showing 1 changed file with 23 additions and 0 deletions.
diff --git a/docker/Dockerfile b/docker/Dockerfile
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+FROM rocker/r-ver:3.6.1
+
+# Install Ubuntu packages
+RUN apt-get update && apt-get install -y \
+    sudo \
+    gdebi-core \
+    pandoc \
+    pandoc-citeproc \
+    libcairo2-dev \
+    libjpeg-dev \
+    libxt-dev \
+    libssl-dev \
+    libcurl4-gnutls-dev \
+    libxml2-dev \
+    libssl-dev
+
+#install necessary libraries
+RUN R -e "install.packages('devtools')"
+RUN R -e "devtools::install_github('LUMC/dgeAnalysis')"
+
+EXPOSE 1402
+
+CMD R -e "library(dgeAnalysis); dgeAnalysis::startApp()"