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  1. theislab/cellrank theislab/cellrank Public

    CellRank: dynamics from multi-view single-cell data

    Python 354 47

  2. theislab/scvelo theislab/scvelo Public

    RNA Velocity generalized through dynamical modeling

    Python 420 104

  3. YosefLab/velovi YosefLab/velovi Public

    Python 39 7

  4. scverse/scanpy scverse/scanpy Public

    Single-cell analysis in Python. Scales to >1M cells.

    Python 2k 608