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Fix compilation errors in C++11. #71

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Fix compilation errors in C++11. #71

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2 changes: 1 addition & 1 deletion SNAPLib/AlignerContext.cpp
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Original file line number Diff line number Diff line change
Expand Up @@ -376,7 +376,7 @@ AlignerContext::printStats()
(stats->filtered > 0) ? numPctAndPad(filtered, stats->filtered, 100.0 * stats->filtered / stats->totalReads, 23, strBufLen) : "",
(stats->extraAlignments > 0) ? FormatUIntWithCommas(stats->extraAlignments, extraAlignments, strBufLen) : "",
isPaired() ? pctAndPad(pctPairs, 100.0 * stats->alignedAsPairs / stats->totalReads, 7, strBufLen) : "",
FormatUIntWithCommas((unsigned _int64)(1000 * stats->totalReads / max(alignTime, (_int64)1)), readsPerSecond, strBufLen), // Aligntime is in ms
FormatUIntWithCommas((_uint64)(1000 * stats->totalReads / max(alignTime, (_int64)1)), readsPerSecond, strBufLen), // Aligntime is in ms
FormatUIntWithCommas((alignTime + 500) / 1000, alignTimeString, strBufLen)
);

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2 changes: 1 addition & 1 deletion SNAPLib/Compat.cpp
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Expand Up @@ -219,7 +219,7 @@ bool WaitForEventWithTimeout(EventObject *eventObject, _int64 timeoutInMillis)

void BindThreadToProcessor(unsigned processorNumber) // This hard binds a thread to a processor. You can no-op it at some perf hit.
{
if (!SetThreadAffinityMask(GetCurrentThread(),((unsigned _int64)1) << processorNumber)) {
if (!SetThreadAffinityMask(GetCurrentThread(),((_uint64)1) << processorNumber)) {
WriteErrorMessage("Binding thread to processor %d failed, %d\n",processorNumber,GetLastError());
}
}
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2 changes: 1 addition & 1 deletion SNAPLib/LandauVishkin.cpp
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Expand Up @@ -51,7 +51,7 @@ bool writeCigar(char** o_buf, int* o_buflen, int count, char code, CigarFormat f
}
int written = snprintf(*o_buf, *o_buflen, "%d%c", count, code);
if (written > *o_buflen - 1) {
*o_buf = '\0';
**o_buf = '\0';
return false;
} else {
*o_buf += written;
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