Skip to content

v3.2.0

Latest
Compare
Choose a tag to compare
@DavyCats DavyCats released this 31 Mar 09:53
  • Added the shallow input to enable shallow mode. Defaults to false.
  • Added the runPolyGTrimming input to control whether or not poly-
    G-tail trimming should be performed by fastp. By default fastp's
    default behaviour will be used, ie. enabled for NextSeq/NovaSeq data
    as determined from the FastQ headers.
  • Added the mappingThreads input to control the number of threads
    used per BWA mem job. Defaults to 8.
  • Added the splitFastq input to control whether fastq files should
    get split into chunks or not. Defaults to true.
  • Added the filterFastq input to control whether fastq files should
    get filtered on quality and read length prior to mapping. Default to
    true.
  • Added the fastpCorrection input to control whether fastp's
    correction should be enabled. DEfaults to true.