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v2.1.0

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@DavyCats DavyCats released this 11 Oct 12:44
· 59 commits to master since this release
7c1b4e0
  • Added a task that generates a table of VAFs (as determined by Purple)
    for somatic variants.
  • Added an output stating the pipeline version.
  • Removed unused breakpointHotspot input.
  • Removed unused peachTranscriptTsv input.
  • Removed unused import of snpEff task.
  • Chunk numbers per input fastq are now calculated based on size.
    The total number of chunks can be set using the
    totalMappingChunks inputs, which defaults to 25.
  • For various jobs the default runtime attributes have been adjusted
    to be more efficient.