show err

brentp · Feb 10, 2017 · ad3cbab · ad3cbab
1 parent 23b9be3
commit ad3cbab
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/tests/functional-test.sh b/tests/functional-test.sh
@@ -120,11 +120,12 @@ assert_exit_code 0
 
 
 refaltend() {
-    ./vcfanno_linux64 -base-path tests/ref-alt-test/ tests/ref-alt-test/tmp_annotations.toml tests/ref-alt-test/tmp_calls.vcf.gz
+    vcfanno -base-path tests/ref-alt-test/ tests/ref-alt-test/tmp_annotations.toml tests/ref-alt-test/tmp_calls.vcf.gz
 }
 run check_ref_alt_posns refaltend
 assert_exit_code 0
 assert_equal 3 $(grep -c ALT_60 $STDOUT_FILE)
 assert_equal 3 $(grep -c HET_60 $STDOUT_FILE)
 assert_equal 3 $(grep -c ALT_90 $STDOUT_FILE)
 assert_equal 3 $(grep -c HET_90 $STDOUT_FILE)
+cat $STDERR_FILE