fix(wdl): Fix docker image versions

broadinstitute · Jan 9, 2025 · f0278e2 · f0278e2
1 parent 5058090
commit f0278e2
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Showing 2 changed files with 3 additions and 3 deletions.
diff --git a/wdl/tasks/alignment/minimap2.wdl b/wdl/tasks/alignment/minimap2.wdl
@@ -20,7 +20,7 @@ task IndexWithMinimap2 {
         boot_disk_gb:       20,
         preemptible_tries:  3,
         max_retries:        2,
-        docker:             "us-central1-docker.pkg.dev/broad-dsp-lrma/pangenome-pipelines/minimap2:latest"
+        docker:             "us-central1-docker.pkg.dev/broad-dsp-lrma/pangenome-pipelines/minimap2:main"
     }
     RuntimeAttr runtime_attr = select_first([runtime_attr_override, default_attr])
     
@@ -78,7 +78,7 @@ task Minimap2WithIx {
         boot_disk_gb:       20,
         preemptible_tries:  3,
         max_retries:        2,
-        docker:             "us-central1-docker.pkg.dev/broad-dsp-lrma/pangenome-pipelines/minimap2:latest"
+        docker:             "us-central1-docker.pkg.dev/broad-dsp-lrma/pangenome-pipelines/minimap2:main"
     }
     RuntimeAttr runtime_attr = select_first([runtime_attr_override, default_attr])
     

diff --git a/wdl/tasks/alignment/samtools.wdl b/wdl/tasks/alignment/samtools.wdl
@@ -18,7 +18,7 @@ task Merge {
         boot_disk_gb:       20,
         preemptible_tries:  3,
         max_retries:        2,
-        docker:             "us-central1-docker.pkg.dev/broad-dsp-lrma/pangenome-pipelines/minimap2:latest"
+        docker:             "us-central1-docker.pkg.dev/broad-dsp-lrma/pangenome-pipelines/minimap2:main"
     }
     RuntimeAttr runtime_attr = select_first([runtime_attr_override, default_attr])