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testing-related fixes#913

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notestaff wants to merge 21 commits intomasterbroadinstitute/viral-ngs:masterfrom is-pytest-fixesbroadinstitute/viral-ngs:is-pytest-fixesCopy head branch name to clipboard

+102-59

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Commits on Jan 18, 2019

• splitting CI into parts

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  b1e2a59

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• fixed travis.yaml

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  df37b03

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• now split into 8 parts

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Commits on Jan 20, 2019

• testing - kmer_utils - drop extraneous skipped-test messages

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  60cb095

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• Merge remote-tracking branch 'github/is-split-ci' into is-pytest-fixes

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  296792a

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• added splitting of ci tests

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• drop slow tests, rather than skip

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• added printing of collection status

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• added msgs about collection of parts

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• updated requirements-conda-tests

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• fix handling when keep_tmp(); on travis, look for tests under test/

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Commits on Jan 30, 2019

• Merge branch 'master' into is-pytest-fixes

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• restored handling of pipelines/snakemake

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  128b0d5

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• added __init__.py files

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  d2ad5d4

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• removed import *

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  f8ce593

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• Merge remote-tracking branch 'github/master' into is-pytest-fixes

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• Merge remote-tracking branch 'github/master' into is-pytest-fixes

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Commits on Feb 3, 2019

• Merge remote-tracking branch 'github/master' into is-pytest-fixes

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Commits on Feb 10, 2019

• Merge branch 'master' into is-pytest-fixes

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Commits on Feb 14, 2019

• Merge branch 'master' into is-pytest-fixes

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Commits on Feb 22, 2019

• Merge branch 'master' into is-pytest-fixes

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