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Build Status PyPI version Documentation Status License: MIT DOI

This package is maintained by Caleb Lareau in the Buenrostro Lab. Source code is made freely available and a packaged install version is provided through PyPi.

About

The proatac package implements our data processing and quality control pipeline bulk ATAC-Seq, single cell ATAC-Seq, and droplet-based ATAC-Seq data.

Workflow Overview

A detailed description of the workflow including a description of various parameter settings is discussed in depth in the proatac documentation. Below is a brief overview of

proatac_overview

Installation/Documentation/FAQ/.etc

Check out the proatac documentation for detailed installation instructions, dependency configuration, and other

Questions/comments/feedback

are always welcomed. The easiest way for us to have correspondence (if appropriate/interesting for the public) is through raising a new issue on the GitHub source. For private concerns, email Caleb.

proatac logo made freely with logomakr these blue and red color definitions.


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