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Remove unused tmp_fasta variable per previous commit
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themisteryang committed Aug 18, 2023
1 parent 74c3c52 commit 29a0300
Showing 1 changed file with 0 additions and 1 deletion.
1 change: 0 additions & 1 deletion src/guide-finder/core/get_sequence.py
Original file line number Diff line number Diff line change
Expand Up @@ -27,7 +27,6 @@ def fetch_sequence(chrom_coord, genome_twobit, output_fasta):
# end for twoBitToFa is non-inclusive, add extra base
start = str(int(start)-1)
seq_param, start_param, end_param = '-seq={0}'.format(chrom), '-start={0}'.format(start), '-end={0}'.format(end)
tmp_fasta = os.path.join(dir_path,"tmp.fa")

try:
twoBitToFaOut = (
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