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Non-coding variant effect prediction: DeepCT #197

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Madelinehazel opened this issue Feb 5, 2024 · 0 comments
Open

Non-coding variant effect prediction: DeepCT #197

Madelinehazel opened this issue Feb 5, 2024 · 0 comments

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@Madelinehazel
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Madelinehazel commented Feb 5, 2024

See if you can get DeepCT working to annotate a VCF with score, then benchmark using non-coding variant test set. Helper pipeline: https://github.com/AIRI-Institute/DeepCT-inference-helper

@suzanahmad suzanahmad assigned suzanahmad and unassigned suzanahmad Feb 21, 2024
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