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Add environment.yml files per directory #43

Merged
merged 13 commits into from
Sep 1, 2023
125 changes: 58 additions & 67 deletions cloud-optimized-geotiffs/cogs-examples.ipynb

Large diffs are not rendered by default.

11 changes: 11 additions & 0 deletions cloud-optimized-geotiffs/environment.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,11 @@
name: coguide-cog
channels:
- conda-forge
dependencies:
- python=3.11
- earthaccess
- ipykernel
- jupyterlab
- matplotlib
- rasterio
- rio-cogeo
10 changes: 10 additions & 0 deletions flatgeobuf/environment.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,10 @@
name: coguide-flatgeobuf
channels:
- conda-forge
dependencies:
- python=3.11
- geopandas==0.13.2
- pyogrio==0.6.0
- ipykernel
- jupyterlab
- pyarrow
87 changes: 51 additions & 36 deletions flatgeobuf/flatgeobuf.ipynb
Original file line number Diff line number Diff line change
Expand Up @@ -43,12 +43,24 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"## Versions\n",
"## Environment\n",
"\n",
"The versions of `pyogrio` and `geopandas` used in this notebook are as follows:\n",
"The packages needed for this notebook can be installed with `conda` or `mamba`. Using the [`environment.yml` from this folder](./environment.yml) run:\n",
"\n",
"```bash\n",
"!pip install pyogrio==0.6.0 geopandas==0.13.2\n",
"conda create -f environment.yml\n",
"```\n",
"\n",
"or\n",
"\n",
"```bash\n",
"mamba create -f environment.yml\n",
"```\n",
"\n",
"Alternatively, you can install the versions of `pyogrio` and `geopandas` used in this notebook with pip:\n",
"\n",
"```bash\n",
"pip install pyogrio==0.6.0 geopandas==0.13.2\n",
"```"
]
},
Expand All @@ -61,7 +73,7 @@
},
{
"cell_type": "code",
"execution_count": 1,
"execution_count": 2,
"metadata": {},
"outputs": [],
"source": [
Expand All @@ -83,7 +95,7 @@
},
{
"cell_type": "code",
"execution_count": 12,
"execution_count": 3,
"metadata": {},
"outputs": [],
"source": [
Expand All @@ -108,14 +120,15 @@
},
{
"cell_type": "code",
"execution_count": 20,
"execution_count": 4,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"518 ms ± 6.57 ms per loop (mean ± std. dev. of 7 runs, 1 loop each)\n"
"CPU times: user 565 ms, sys: 16.9 ms, total: 582 ms\n",
"Wall time: 685 ms\n"
]
}
],
Expand All @@ -132,14 +145,15 @@
},
{
"cell_type": "code",
"execution_count": 21,
"execution_count": 5,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"28.9 ms ± 468 µs per loop (mean ± std. dev. of 7 runs, 10 loops each)\n"
"CPU times: user 25.3 ms, sys: 6.84 ms, total: 32.1 ms\n",
"Wall time: 31.3 ms\n"
]
}
],
Expand All @@ -156,14 +170,15 @@
},
{
"cell_type": "code",
"execution_count": 19,
"execution_count": 6,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"24 ms ± 351 µs per loop (mean ± std. dev. of 7 runs, 10 loops each)\n"
"CPU times: user 19.7 ms, sys: 10.1 ms, total: 29.7 ms\n",
"Wall time: 29.1 ms\n"
]
}
],
Expand All @@ -184,15 +199,15 @@
},
{
"cell_type": "code",
"execution_count": 31,
"execution_count": 7,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"CPU times: user 354 ms, sys: 32 ms, total: 386 ms\n",
"Wall time: 394 ms\n"
"CPU times: user 362 ms, sys: 44.4 ms, total: 407 ms\n",
"Wall time: 418 ms\n"
]
}
],
Expand All @@ -202,15 +217,15 @@
},
{
"cell_type": "code",
"execution_count": 32,
"execution_count": 8,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"CPU times: user 61 ms, sys: 23.5 ms, total: 84.5 ms\n",
"Wall time: 94 ms\n"
"CPU times: user 60.8 ms, sys: 23.4 ms, total: 84.2 ms\n",
"Wall time: 83.5 ms\n"
]
}
],
Expand All @@ -231,7 +246,7 @@
},
{
"cell_type": "code",
"execution_count": 2,
"execution_count": 9,
"metadata": {},
"outputs": [],
"source": [
Expand All @@ -247,7 +262,7 @@
},
{
"cell_type": "code",
"execution_count": 3,
"execution_count": 10,
"metadata": {},
"outputs": [
{
Expand All @@ -270,7 +285,7 @@
" 'dataset_metadata': None}"
]
},
"execution_count": 3,
"execution_count": 10,
"metadata": {},
"output_type": "execute_result"
}
Expand All @@ -294,7 +309,7 @@
},
{
"cell_type": "code",
"execution_count": 4,
"execution_count": 11,
"metadata": {},
"outputs": [],
"source": [
Expand All @@ -312,15 +327,15 @@
},
{
"cell_type": "code",
"execution_count": 5,
"execution_count": 12,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"CPU times: user 154 ms, sys: 44 ms, total: 198 ms\n",
"Wall time: 4.75 s\n"
"CPU times: user 144 ms, sys: 21.4 ms, total: 165 ms\n",
"Wall time: 6 s\n"
]
}
],
Expand All @@ -337,15 +352,15 @@
},
{
"cell_type": "code",
"execution_count": 6,
"execution_count": 13,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"CPU times: user 40.6 ms, sys: 16.5 ms, total: 57 ms\n",
"Wall time: 2 s\n"
"CPU times: user 26.9 ms, sys: 2.98 ms, total: 29.9 ms\n",
"Wall time: 490 ms\n"
]
}
],
Expand All @@ -362,7 +377,7 @@
},
{
"cell_type": "code",
"execution_count": 7,
"execution_count": 14,
"metadata": {},
"outputs": [
{
Expand Down Expand Up @@ -511,7 +526,7 @@
"4 MULTIPOLYGON (((4.41135 44.85476, 4.41134 44.8... "
]
},
"execution_count": 7,
"execution_count": 14,
"metadata": {},
"output_type": "execute_result"
}
Expand All @@ -522,7 +537,7 @@
},
{
"cell_type": "code",
"execution_count": 8,
"execution_count": 15,
"metadata": {},
"outputs": [
{
Expand All @@ -531,7 +546,7 @@
"(415, 11)"
]
},
"execution_count": 8,
"execution_count": 15,
"metadata": {},
"output_type": "execute_result"
}
Expand All @@ -549,15 +564,15 @@
},
{
"cell_type": "code",
"execution_count": 11,
"execution_count": 16,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"CPU times: user 29 ms, sys: 2.63 ms, total: 31.6 ms\n",
"Wall time: 439 ms\n"
"CPU times: user 25 ms, sys: 2.47 ms, total: 27.4 ms\n",
"Wall time: 706 ms\n"
]
}
],
Expand All @@ -568,7 +583,7 @@
},
{
"cell_type": "code",
"execution_count": 12,
"execution_count": 17,
"metadata": {},
"outputs": [
{
Expand Down Expand Up @@ -654,7 +669,7 @@
"4 MULTIPOLYGON (((4.41135 44.85476, 4.41134 44.8... "
]
},
"execution_count": 12,
"execution_count": 17,
"metadata": {},
"output_type": "execute_result"
}
Expand Down
18 changes: 18 additions & 0 deletions geoparquet/environment.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,18 @@
name: coguide-geoparquet
channels:
- conda-forge
dependencies:
- python=3.11
- aiohttp
# TODO: how to define "fsspec[http]", so we don't have to manually install aiohttp
- fsspec
- geopandas==0.13.2
- ipykernel
- jupyterlab
- libgdal-arrow-parquet
- requests
# This is a hack to install pyarrow via pip because libgdal-arrow-parquet constrains libarrow to
# v10, which constrains pyarrow to v10, which is too old for the `filesystem` parameter at the end
# of the file
- pip:
- pyarrow
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This hack should be able to be removed after conda-forge/gdal-feedstock#796 is merged

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