Update install_and_test.yml: GITHUB_ENV #10

	# This workflow will setup conda, create a virtual environment with required packages and dependencies,
	# execute script utils/create_test_files.py,
	# and run tests with pytest

	name: Install and run tests

	on:
	push:
	branches: [ "main", "dev" ]
	pull_request:
	branches: [ "main", "dev" ]

	#permissions:
	# contents: read

	jobs:
	build:
	name: Install and test on (${{ matrix.os }}, Miniforge)
	runs-on: ${{ matrix.os }}
	strategy:
	matrix:
	os: ["ubuntu-latest"]
	python-version: ["3.11.5"]
	defaults:
	run:
	shell: bash -el {0}
	steps:
	- uses: actions/checkout@v4
	- name: Setup conda environment
	uses: conda-incubator/setup-miniconda@v3
	with:
	auto-update-conda: false
	python-version: ${{ matrix.python-version }}
	environment-file: environment_dev.yaml
	activate-environment: oac
	miniforge-version: latest
	- name: Conda info
	run: \|
	conda info
	conda list
	- name: Set PYTHONPATH variable
	run: \|
	PYTHONPATH="$GITHUB_WORKSPACE/utils:$GITHUB_WORKSPACE/tests:$PYTHONPATH"
	echo "PYTHONPATH=$PYTHONPATH" >> $GITHUB_ENV
	echo $GITHUB_ENV
	- name: Create test files
	run: \|
	cd utils/
	chmod a+x create_test_files.py
	python create_test_files.py
	cd ..
	- name: Test with pytest
	run: \|
	cd tests/
	pytest

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