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Get correct centers of mass from rois.com even when swap_dim is True in get_contours #1370

Merged
merged 7 commits into from
Jul 9, 2024
Merged

Get correct centers of mass from rois.com even when swap_dim is True in get_contours #1370

merged 7 commits into from
Jul 9, 2024

Commits on Jul 2, 2024

  1. Fix CoM calculation when swap_dim is true

    @ethanbb
    ethanbb committed Jul 2, 2024
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  2. Fix plot_contours to use CoMs from updated get_contours

    @ethanbb
    ethanbb committed Jul 2, 2024
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  3. Add rewritten com function with C/F order and add test

    @ethanbb
    ethanbb committed Jul 2, 2024
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Commits on Jul 5, 2024

  1. Restore individual dimension arguments for com

    @ethanbb
    ethanbb committed Jul 5, 2024
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  2. Add slice_dim option for get_contours and 3D test for swap_dim

    @ethanbb
    ethanbb committed Jul 5, 2024
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  3. Minor changes to make contours more consistent/predictable

    @ethanbb
    ethanbb committed Jul 5, 2024
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Commits on Jul 8, 2024

  1. Use None instead of 'auto'

    @ethanbb
    ethanbb committed Jul 8, 2024
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