Clean up pipeline tests #1295

Job	Run time
samplesheet \| docker \| NF-24.04.2	6m 1s
samplesheet_multisample_bam \| docker \| NF-24.04.2	7m 29s
samplesheet_multisample_ont_bam \| docker \| NF-24.04.2	6m 10s
SHORT_VARIANT_CALLING \| docker \| NF-24.04.2	9m 15s
SNV_ANNOTATION \| docker \| NF-24.04.2	3m 31s
CALL_SVS \| docker \| NF-24.04.2	6m 28s
ANNOTATE_SVS \| docker \| NF-24.04.2	1m 55s
RANK_VARIANTS \| docker \| NF-24.04.2	4m 2s
samplesheet \| docker \| NF-latest-everything	6m 11s
samplesheet_multisample_bam \| docker \| NF-latest-everything	7m 58s
samplesheet_multisample_ont_bam \| docker \| NF-latest-everything	6m 28s
SHORT_VARIANT_CALLING \| docker \| NF-latest-everything	9m 5s
SNV_ANNOTATION \| docker \| NF-latest-everything	3m 51s
CALL_SVS \| docker \| NF-latest-everything	6m 9s
ANNOTATE_SVS \| docker \| NF-latest-everything	1m 58s
RANK_VARIANTS \| docker \| NF-latest-everything	4m 0s
	1h 30m 31s

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