Fixing README.md

jenniferlu717 · Sep 10, 2018 · add289b · add289b
1 parent 6ca53b7
commit add289b
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/README.md b/README.md
@@ -78,7 +78,7 @@ Do not run bracken-build with MiniKraken.
 
 ## Step 3: Run Bracken for Abundance Estimation
         
-        bracken --d ${KRAKEN_DB} -i ${SAMPLE}.kreport -o ${SAMPLE}.bracken -r ${READ_LEN} -l ${LEVEL} -t ${THRESHOLD}
+        bracken -d ${KRAKEN_DB} -i ${SAMPLE}.kreport -o ${SAMPLE}.bracken -r ${READ_LEN} -l ${LEVEL} -t ${THRESHOLD}
 
 
 # RUNNING BRACKEN: HARD VERSION