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Issues list

ERROR: this R is version 4.4.2, package 'GAPIT' requires R <= 4.4.1
#167 opened Dec 27, 2024 by Galaxy-228
1
stack in "Mixed model with Kinship"
#166 opened Dec 25, 2024 by Zhao-My
1
Inquiry Regarding GAPIT Installation and Error on Mac Pro M1 Chip
#165 opened Dec 13, 2024 by jeong2624
1
Got some problems in genotype data transformation
#164 opened Dec 9, 2024 by hougeng
1
Issue with SNP Effect Calculation in GAPIT 3.4
#163 opened Dec 3, 2024 by PetrosRoth
5
Error in if (lev[1] != inter) { : the condition has length > 1
#162 opened Nov 22, 2024 by AvniMann14
2
Estimation of SNP effect in FarmCPU
#161 opened Nov 16, 2024 by ana-carolina-sa
2
HapMap format
#160 opened Nov 11, 2024 by Lamoumni18
3
In the GAPIT$GM results, some variant loci were identified where all sample genotypes were 0.
#159 opened Nov 5, 2024 by dozhun
1
Error in hist.default(r1, plot = FALSE) : invalid number of 'breaks' Calls: GAPIT ... GAPIT.Genotype -> GAPIT.Genotype.View -> hist -> hist.default In addition: There were 50 or more warnings (use warnings() to see the first 50)
#158 opened Oct 28, 2024 by lr192
2
The need for help on error reports arose during GAPIT 3 use.
#157 opened Oct 23, 2024 by Beawo
1
FarmCPU not running
#156 opened Oct 22, 2024 by sjclare
7
GAPIT 3: Error in count.temp[, 2] : subscript out of bounds
#155 opened Oct 8, 2024 by Samrath0402
7
Issue with warnings about 'memory.size()'
#154 opened Oct 4, 2024 by zjwinn
2
Add the pedigree in the GWAS analysis
#153 opened Oct 1, 2024 by Gpolizel
1
PVE for all SNPs
#152 opened Sep 30, 2024 by sandeepgowdan
1
FarmCPU, GLM model implementation error
#151 opened Sep 26, 2024 by 9437951970
1
Maarkers as a covariate
#150 opened Sep 24, 2024 by janamacharya
Previous version
#149 opened Sep 23, 2024 by emmahovhannisyan22
1
Two populations and several phenotypes
#148 opened Sep 20, 2024 by Gpolizel
Is there a way to make the model not correct by kinship?
#147 opened Sep 19, 2024 by Hidroxiapatito
1
Error in count.temp[, 2] : subscript out of bounds
#146 opened Sep 18, 2024 by emmahovhannisyan22
3
Error in if (lev[1] != inter) { : the condition has length > 1
#145 opened Sep 16, 2024 by grtomam1
9
gwas by GAPIT
#144 opened Sep 12, 2024 by prabirbioinfo
1
Assistance needed with GAPIT version issue and missing Manhattan plots
#143 opened Sep 10, 2024 by Mounawarath
1
ProTip! Exclude everything labeled bug with -label:bug.