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46 Open 62 Closed
46 Open 62 Closed
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Issues list

[feat] create a nf-core pipeline config for the pipeline enhancement New feature or request
#180 opened Sep 25, 2024 by JoseEspinosa
@JoseEspinosa
[feat] outsource python package to a different repo ready for pip deployment high priority
#179 opened Sep 12, 2024 by mathysgrapotte nf-core 1.0.0 release
[feat] parallelize predict wrapper
#178 opened Sep 1, 2024 by suzannejin
2
[feat] experiment conf json "custom" section should provide a slot "name" for the naming of each configuration
#176 opened Aug 30, 2024 by suzannejin
[feat] analysis default should provide figures about the prediction values
#175 opened Aug 30, 2024 by suzannejin
[feat] add a way to assess the impact of different initial weights on the learning
#171 opened Jul 30, 2024 by suzannejin
[feat] python module to validate the tune config fields. enhancement New feature or request
#167 opened Jul 26, 2024 by alessiovignoli
4 tasks
@alessiovignoli
1
[feat] GaussianChunk to nf-test handle_data.nf.test enhancement New feature or request good to have Future features that are good to explore/have
#165 opened Jul 18, 2024 by alessiovignoli
[feat] robust way of defining and importing the model class good to have Future features that are good to explore/have
#158 opened Jul 10, 2024 by suzannejin
ray init does not automaticly detect GPUs bug Something isn't working
#157 opened Jun 17, 2024 by alessiovignoli
[feat] add a check on split parameters values. enhancement New feature or request good first issue Good for newcomers
#151 opened May 24, 2024 by alessiovignoli
[bug] If there is only one metric, analysis step crashes
#148 opened May 15, 2024 by luisas
@luisas
1
Performance: define metrics per class
#147 opened May 15, 2024 by luisas
[feat] have test data in a different repo high priority
#146 opened May 15, 2024 by luisas nf-core 1.0.0 release
1
[feat] resume ray tune
#144 opened May 14, 2024 by suzannejin
[feat] add an early stopper for ray tune
#142 opened May 14, 2024 by suzannejin
1
[feature] add logging functionalities enhancement New feature or request
#138 opened May 14, 2024 by mathysgrapotte
[analysis] provide a report of auc vs data modification
#136 opened May 13, 2024 by suzannejin
[test] write unittest for analysis default block
#135 opened May 13, 2024 by suzannejin
[feat] add noise to class labels enhancement New feature or request high priority
#134 opened May 13, 2024 by suzannejin
[test] Write tests for Predict class
#129 opened May 8, 2024 by luisas
[feat] add padding/truncation as data modification enhancement New feature or request
#128 opened May 8, 2024 by luisas
If batch size to test is bigger than data size, it throws a not easy to understand error. Do a check or a warning.
#124 opened May 7, 2024 by luisas
@alessiovignoli
Config yaml breaks (with no good error message) if data_params is not given. bug Something isn't working
#121 opened May 6, 2024 by luisas
[feat] take as input Yaml for transform and split information enhancement New feature or request good to have Future features that are good to explore/have
#117 opened May 6, 2024 by alessiovignoli
4 tasks
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