GIT: Merge pull request #1 from GavinHuttley/main

Small tweaks for portability and simplifying user experience
metagentools · Jun 7, 2024 · 103984d · 103984d
2 parents 79c7d6c + 9238509
commit 103984d
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Showing 2 changed files with 6 additions and 7 deletions.
diff --git a/DEMO.md b/DEMO.md
@@ -26,12 +26,6 @@ Activate the environment.
 conda activate gbintk
 ```
 
-Now let's install `gbintk` using the following command.
-
-```bash
-flit install
-```
-
 Test your installation.
 
 ```bash
@@ -84,4 +78,4 @@ Below are some example visualisations generated.
 
 <p align="center">
   <img src="https://raw.githubusercontent.com/metagentools/gbintk/master/docs/final_GraphBin_binning_result.png" width="700" title="Refined binning result" alt="Refined binning result">
-</p>
+</p>
diff --git a/environment.yml b/environment.yml
@@ -8,10 +8,15 @@ dependencies:
   - click
   - biopython
   - python-igraph
+  - cairo
+  - pkg-config
   - fraggenescan
   - hmmer
   - networkx
   - scipy
   - numpy
   - pandas
   - tqdm
+  - pip
+  - pip:
+    - .