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17.1.0

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@victorlin victorlin released this 19 Aug 20:48
· 1330 commits to master since this release

Features

  • refine: Upgrade TreeTime from 0.8.6 to >= 0.9.2 which enables a speedup of timetree inference in marginal mode due to the use of Fast Fourier Transforms #1018. (@rneher and @anna-parker)

Bug Fixes

  • refine, export v1: Use pandas.DataFrame.at instead of .loc for single values #979. (@victorlin)
  • refine: Gracefully handle all exceptions from TreeTime #1023. (@anna-parker)
  • refine: Document branch length units treetime expects #1024. (@anna-parker)
  • dates: Raise an error when metadata to get_numerical_dates() is not a pandas DataFrame #1026. (@victorlin)