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clonal_threshold accepts multiple values in nextflow_schema.json #1047

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clonal_threshold accepts multiple values in nextflow_schema.json

clonal_threshold accepts multiple values in nextflow_schema.json #1047

Re-run triggered December 22, 2023 16:39
@ggabernetggabernet
#293
adamrtalbot:292_clonal_threshold_accepts_multiple_values
Status Cancelled
Total duration 15m 11s
Artifacts 5

ci.yml

on: pull_request
Matrix: Run pipeline with test data
Matrix: Run workflow test with different profiles
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11 errors and 6 warnings
Run pipeline with test data (latest-everything)
Process completed with exit code 1.
Run workflow test with different profiles (latest-everything, test_assembled_mm)
Process completed with exit code 1.
Run workflow test with different profiles (latest-everything, test_no_umi)
Process completed with exit code 1.
Run pipeline with test data (23.04.0)
The job was canceled because "latest-everything" failed.
Run pipeline with test data (23.04.0)
The operation was canceled.
Run workflow test with different profiles (latest-everything, test_assembled_hs)
Process completed with exit code 1.
Run workflow test with different profiles (latest-everything, test_tcr)
Process completed with exit code 1.
Run workflow test with different profiles (latest-everything, test_nocluster)
Process completed with exit code 1.
Run workflow test with different profiles (latest-everything, test_fetchimgt)
ENOENT: no such file or directory, stat '/home/runner/work/airrflow/airrflow/work/52/e8e9a087649964ed1f2090247f1a33/imgtdb_base/human/vdj_aa/imgt_aa_human_IGHV.fasta.tmp'
Run workflow test with different profiles (latest-everything, test_fetchimgt)
The operation was canceled.
Run workflow test with different profiles (latest-everything, test_fetchimgt)
Process completed with exit code 1.
Run workflow test with different profiles (latest-everything, test_assembled_mm)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run workflow test with different profiles (latest-everything, test_no_umi)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run workflow test with different profiles (latest-everything, test_assembled_hs)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run workflow test with different profiles (latest-everything, test_tcr)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run workflow test with different profiles (latest-everything, test_nocluster)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run workflow test with different profiles (latest-everything, test_fetchimgt)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

Artifacts

Produced during runtime
Name Size
logs-test_assembled_hs Expired
28.7 MB
logs-test_assembled_mm Expired
28.2 MB
logs-test_no_umi Expired
31 MB
logs-test_nocluster Expired
47.2 MB
logs-test_tcr Expired
28.9 MB