Cellranger vdj #196
ci_immcantation.yml
on: pull_request
Matrix: Run workflow with immcantation devel test_container
Annotations
8 errors and 12 warnings
Run workflow with immcantation devel test_container (latest-everything, test_assembled_immcantati...
Process completed with exit code 1.
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Run workflow with immcantation devel test_container (23.04.0, test_assembled_immcantation_devel_hs)
Process completed with exit code 1.
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Run workflow with immcantation devel test_container (23.04.0, test_assembled_immcantation_devel_mm)
Process completed with exit code 1.
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Run workflow with immcantation devel test_container (latest-everything, test_raw_immcantation_devel)
Artifact path is not valid: /work/airrflow/airrflow/work/1e/eab49ab4cbcceddfc9a9a2e362b87d/?/.java/fonts/17.0.3-internal/fcinfo-1-e96651a32e80-Linux-6.5.0-1015-azure-en-.properties. Contains the following character: Question mark ?
Invalid characters include: Double quote ", Colon :, Less than <, Greater than >, Vertical bar |, Asterisk *, Question mark ?, Carriage return \r, Line feed \n
The following characters are not allowed in files that are uploaded due to limitations with certain file systems such as NTFS. To maintain file system agnostic behavior, these characters are intentionally not allowed to prevent potential problems with downloads on different file systems.
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Run workflow with immcantation devel test_container (latest-everything, test_raw_immcantation_devel)
Process completed with exit code 1.
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Run workflow with immcantation devel test_container (23.04.0, test_raw_immcantation_devel)
Artifact path is not valid: /work/airrflow/airrflow/work/09/d6e39c9ad2937db61e5caf75acb46c/?/.java/fonts/17.0.3-internal/fcinfo-1-363c8b6edeef-Linux-6.5.0-1015-azure-en-.properties. Contains the following character: Question mark ?
Invalid characters include: Double quote ", Colon :, Less than <, Greater than >, Vertical bar |, Asterisk *, Question mark ?, Carriage return \r, Line feed \n
The following characters are not allowed in files that are uploaded due to limitations with certain file systems such as NTFS. To maintain file system agnostic behavior, these characters are intentionally not allowed to prevent potential problems with downloads on different file systems.
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Run workflow with immcantation devel test_container (23.04.0, test_raw_immcantation_devel)
Process completed with exit code 1.
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Run workflow with immcantation devel test_container (latest-everything, test_assembled_immcantati...
Process completed with exit code 1.
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Run workflow with immcantation devel test_container (latest-everything, test_assembled_immcantati...
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1, actions/upload-artifact@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Run workflow with immcantation devel test_container (latest-everything, test_assembled_immcantati...
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Run workflow with immcantation devel test_container (23.04.0, test_assembled_immcantation_devel_hs)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1, actions/upload-artifact@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Run workflow with immcantation devel test_container (23.04.0, test_assembled_immcantation_devel_hs)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Run workflow with immcantation devel test_container (23.04.0, test_assembled_immcantation_devel_mm)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1, actions/upload-artifact@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Run workflow with immcantation devel test_container (23.04.0, test_assembled_immcantation_devel_mm)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Run workflow with immcantation devel test_container (latest-everything, test_raw_immcantation_devel)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1, actions/upload-artifact@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Run workflow with immcantation devel test_container (latest-everything, test_raw_immcantation_devel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Run workflow with immcantation devel test_container (23.04.0, test_raw_immcantation_devel)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1, actions/upload-artifact@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Run workflow with immcantation devel test_container (23.04.0, test_raw_immcantation_devel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
|
Run workflow with immcantation devel test_container (latest-everything, test_assembled_immcantati...
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1, actions/upload-artifact@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
|
Run workflow with immcantation devel test_container (latest-everything, test_assembled_immcantati...
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Artifacts
Produced during runtime
Name | Size | |
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logs-test_assembled_immcantation_devel_hs
Expired
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231 MB |
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logs-test_assembled_immcantation_devel_mm
Expired
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299 MB |
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