Minor bug fixes #1141

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Triggered via pull request April 11, 2024 14:10

ggabernet

opened #319

ggabernet:dev

Status Cancelled

Total duration 14m 40s

Artifacts –

ci.yml

on: pull_request

Matrix: Run pipeline with test data

Matrix: Run workflow test with different profiles

Annotations

12 errors and 14 warnings

Run workflow test with different profiles (23.04.0, test_tcr)

Canceling since a higher priority waiting request for 'nf-core CI-319' exists

Run workflow test with different profiles (23.04.0, test_tcr)

The operation was canceled.

Run workflow test with different profiles (latest-everything, test_fetchimgt)

Canceling since a higher priority waiting request for 'nf-core CI-319' exists

Run workflow test with different profiles (latest-everything, test_fetchimgt)

The operation was canceled.

Run pipeline with test data (latest-everything)

Canceling since a higher priority waiting request for 'nf-core CI-319' exists

Run pipeline with test data (latest-everything)

The operation was canceled.

Run workflow test with different profiles (23.04.0, test_fetchimgt)

Canceling since a higher priority waiting request for 'nf-core CI-319' exists

Run workflow test with different profiles (23.04.0, test_fetchimgt)

The operation was canceled.

Run pipeline with test data (23.04.0)

Canceling since a higher priority waiting request for 'nf-core CI-319' exists

Run pipeline with test data (23.04.0)

The operation was canceled.

Run workflow test with different profiles (latest-everything, test_tcr)

Canceling since a higher priority waiting request for 'nf-core CI-319' exists

Run workflow test with different profiles (latest-everything, test_tcr)

The operation was canceled.

Run workflow test with different profiles (latest-everything, test_10x_sc)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run workflow test with different profiles (23.04.0, test_no_umi)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run workflow test with different profiles (23.04.0, test_10x_sc)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run workflow test with different profiles (23.04.0, test_nebnext_umi)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run workflow test with different profiles (latest-everything, test_nebnext_umi)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run workflow test with different profiles (latest-everything, test_assembled_hs)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run workflow test with different profiles (23.04.0, test_assembled_hs)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run workflow test with different profiles (23.04.0, test_assembled_mm)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run workflow test with different profiles (latest-everything, test_assembled_mm)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run workflow test with different profiles (latest-everything, test_no_umi)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run workflow test with different profiles (23.04.0, test_clontech_umi)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run workflow test with different profiles (latest-everything, test_clontech_umi)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run workflow test with different profiles (latest-everything, test_nocluster)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run workflow test with different profiles (23.04.0, test_nocluster)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.